BAC Information

Click to search

BAC

Clone NameB6Ng01-325F02
Chromosome15 (Build37)
Map Location 84,980,014 - 84,981,121
singlet/doubletsinglet
Overlap genenone
Upstream genePnpla3, Samm50, Parvb, Parvg, LOC382988, 1810041L15Rik, Ldoc1l, Arhgap8, 3110043J09Rik, Phf21b, LOC100043084, 4930513L16Rik, Nup50, 5031439G07Rik, LOC628135, Upk3a, 3110048E14Rik, Smc1b, Ribc2
Downstream geneFbln1, Atxn10, EG223745, Wnt7b, LOC100042240, Ppara, 2210021J22Rik, Pkdrej, AW124722, Gtse1, Trmu, Celsr1, BC021523, Cerk
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325F02.bB6Ng01-325F02.g
ACCGA113407GA113408
length9181,107
definitionB6Ng01-325F02.b B6Ng01-325F02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcatattggttccctgaactgtagagtgagggctattatggttg
gaaaggccaaatggaagcctttagagttgcctctgccaaagaaaatagtg
aatcaaaaacagtatcgtattcctggaggaattgcagaaattactgccac
tatcaaggacttgaaagatgcaggggtggtggttcccaccacatctccat
ttaactctcctatctggccagtgcagaaaacagatggatcatggagaatg
acagttgattaccgaaaactaaatcaggtagtaactccaattgcagctgc
tgtaccagatgtagtttccttacttgagcaaattaacacatctcctggca
cctggtatgcggctattgatctggcaaatgccttcttctcagtacctgtc
cataaggaccaccagaagcaatttgctttcagttggcaaggccaacagta
taccttcacagttttgcctcaaggatatattaactctcctgccctgtgtc
ataatttagttagaagggatcttgatcgtttggatcttccacaaaatatc
acattggtgcactatattgatgacattatgctgattggaccaagtgagca
ggaagtagcaaccactttggactcattggtaacacatatgcgtatcagag
gatgggaaataaatccaaccaaaattcaaggaccatctacctcagtgaaa
ttcttaggagtccagtggtgtggggcatgcagagatatttccttctaagg
tgaaagataagttattgcacctggcccctcctagaaccaagaaaagaagc
acaacttttagtgggtctatttggattctggagaacaacacatcccttca
ctttgggtgtgtctacttaggccctattaccaagtgattcggaaagcttg
ctagctttgtgtgggggc
gaattctcagtggttgtttaaaatctttgacactcagcaggaaacaccaa
cgagatgctgaatgaggggcgctgttcccgtctcaacatccctgtagtat
cccatgtctctctgggctgccttggagtggcccttgaggctacacaccca
caagcacactcctctgcggtcccagaacaccgtagatttattcatagaag
tgagagaagtcctcagcagaaaacctgatgtgatagtctcaagttagttt
tgcgagggcaaggggctgactggaaaagcgcctgatggtgccaatcagac
acgaatagaagttggtcctggaagaaagcaggcacgactccgtacccaca
gcattcctaagattcattctccacattaaaccataagaagactcgtggga
gggcattaaacacaagagacctggcccctgtgggtaaccgctagtggaag
cggccatctgcacttggatctccaggaacttcaggtgatgcagctctcag
atgccacagttttgaaagtgccagcgtcttaggctcctagcttcgacggg
tgaccatcctagactctgttgctatacacaacagaaaatgatcatataag
ttaaaaactatttccagtgtggcaacagctcaggactacagcctctggga
gagaaacaggtgagctgcctgagcttctgggagtcctccctgcagatgca
gtgctctggtagatggaggggctgcacactggctgtgggtggagacttgg
gtaggacacaccagcctccctgagttcagaaatagctggggcagagatac
cacatgacccagcaatcttacccttcagtagtactccagagaacttgaat
gtccacagaaacactatatgcccatctgtcgaatggatcaacaaatgtgt
catctctatacagtgatcattcagccatagaaagaaatgagatgccgaca
gaacacacagatcatgcatggttagaaaaagatgctaagggcagaagaag
cctgtcaccaaaagggccacaccacagtagactgccatttctcaatgtag
gacatggtccagaaatagaatcttccagacgagcagtataccttttgcta
gacaggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_84980014_84981121
seq2: B6Ng01-325F02.g_67_1173

seq1  GAATTCTCAGTGGTTGTTTAAAATCTTTGACACTCAGCAGGAAACACCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGTGGTTGTTTAAAATCTTTGACACTCAGCAGGAAACACCAA  50

seq1  CGAGATGCTGAATGAGGGGCGCTGTTCCCGTCTCAACATCCCTGTAGTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGATGCTGAATGAGGGGCGCTGTTCCCGTCTCAACATCCCTGTAGTAT  100

seq1  CCCATGTCTCTCTGGGCTGCCTTGGAGTGGCCCTTGAGGCTACACACCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGTCTCTCTGGGCTGCCTTGGAGTGGCCCTTGAGGCTACACACCCA  150

seq1  CAAGCACACTCCTCTGCGGTCCCAGAACACCGTAGATTTATTCATAGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCACACTCCTCTGCGGTCCCAGAACACCGTAGATTTATTCATAGAAG  200

seq1  TGAGAGAAGTCCTCAGCAGAAAACCTGATGTGATAGTCTCAAGTTAGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGAAGTCCTCAGCAGAAAACCTGATGTGATAGTCTCAAGTTAGTTT  250

seq1  TGCGAGGGCAAGGGGCTGACTGGAAAAGCGCCTGATGGTGCCAATCAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGAGGGCAAGGGGCTGACTGGAAAAGCGCCTGATGGTGCCAATCAGAC  300

seq1  ACGAATAGAAGTTGGTCCTGGAAGAAAGCAGGCACGACTCCGTACCCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAATAGAAGTTGGTCCTGGAAGAAAGCAGGCACGACTCCGTACCCACA  350

seq1  GCATTCCTAAGATTCATTCTCCACATTAAACCATAAGAAGACTCGTGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCCTAAGATTCATTCTCCACATTAAACCATAAGAAGACTCGTGGGA  400

seq1  GGGCATTAAACACAAGAGACCTGGCCCCTGTGGGTAACCGCTAGTGGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATTAAACACAAGAGACCTGGCCCCTGTGGGTAACCGCTAGTGGAAG  450

seq1  CGGCCATCTGCACTTGGATCTCCAGGAACTTCAGGTGATGCAGCTCTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCCATCTGCACTTGGATCTCCAGGAACTTCAGGTGATGCAGCTCTCAG  500

seq1  ATGCCACAGTTTTGAAAGTGCCAGCGTCTTAGGCTCCTAGCTTCGACGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCACAGTTTTGAAAGTGCCAGCGTCTTAGGCTCCTAGCTTCGACGGG  550

seq1  TGACCATCCTAGACTCTGTTGCTATACACAACAGAAAATGATCATATAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCATCCTAGACTCTGTTGCTATACACAACAGAAAATGATCATATAAG  600

seq1  TTAAAAACTATTTCCAGTGTGGCAACAGCTCAGGACTACAGCCTCTGGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAACTATTTCCAGTGTGGCAACAGCTCAGGACTACAGCCTCTGGGA  650

seq1  GAGAAACAGGTGAGCTGCCTGAGCTTCTGGGAGTCCTCCCTGCAGATGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAACAGGTGAGCTGCCTGAGCTTCTGGGAGTCCTCCCTGCAGATGCA  700

seq1  GTGCTCTGGTAGATGGAGGGGCTGCACACTGGCTGTGGGTGGAGACTTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCTGGTAGATGGAGGGGCTGCACACTGGCTGTGGGTGGAGACTTGG  750

seq1  GTAGGACACACCAGCCTCCCTGAGTTCAGAAATAGCTGGGGCAGAGATAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGACACACCAGCCTCCCTGAGTTCAGAAATAGCTGGGGCAGAGATAC  800

seq1  CACATGACCCAGCAATCTTACCCTTCAGTAGTACTCCAGAGAACTTGAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGACCCAGCAATCTTACCCTTCAGTAGTACTCCAGAGAACTTGAAT  850

seq1  GTCCACAGAAACACTATATGCCCATCTGTCGAATGGATCAACAAATGTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCACAGAAACACTATATGCCCATCTGTCGAATGGATCAACAAATGTGT  900

seq1  CATCTCTATACAGTGATCATTCAGCCATAGAAAGAAATGAGATGCCGACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTATACAGTGATCATTCAGCCATAGAAAGAAATGAGATGCCGACA  950

seq1  GAACACACAGATCATGCATGGTTTAGAAAAGATGCCAAGGGCAGAAGAAG  1000
      |||||||||||||||||||||||   ||||||||| ||||||||||||||
seq2  GAACACACAGATCATGCATGGTTAGAAAAAGATGCTAAGGGCAGAAGAAG  1000

seq1  CCTGTCAC--AAAAGGCCACA-CACAGTAGGACTGCATTTTCTTTCATGT  1047
      ||||||||  ||| ||||||| ||||||| ||||||  |||| |  ||||
seq2  CCTGTCACCAAAAGGGCCACACCACAGTA-GACTGCCATTTC-TCAATGT  1048

seq1  AGGACAT-GTCCAG-AATAGATCTTTCGAGACGAAGCAGGTTATA-CTTT  1094
      ||||||| |||||| ||||||   ||| ||||| |||||  |||| ||||
seq2  AGGACATGGTCCAGAAATAGAATCTTCCAGACG-AGCAG--TATACCTTT  1095

seq1  TGCTAGGGACAGGC  1108
      |||||  |||||||
seq2  TGCTA--GACAGGC  1107