BAC Information

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BAC

Clone NameB6Ng01-325K15
Chromosome15 (Build37)
Map Location 67,627,401 - 67,765,293
singlet/doubletdoublet
Overlap genenone
Upstream geneTg, Sla, Wisp1, Ndrg1, LOC100040667, St3gal1
Downstream geneZfat1, LOC100041000, EG665945, EG633752, Khdrbs3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325K15.bB6Ng01-325K15.g
ACCGA113665GA113666
length1,278368
definitionB6Ng01-325K15.b B6Ng01-325K15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,764,021 - 67,765,293)(67,627,401 - 67,627,774)
sequence
gaattccatggttatacagttgctgtgctctaatttctacccttgtcata
tcccatagcatctttctctaggtgactctacacctggatctacacctgga
gtattctctctccttataataacaccactttttattttttcaagaataac
atctgcttaactttttgccttatgtaaaaattctgcttccaaatgggatc
acagtcatagggatccgggggttgagatgtcaacgtatctctttagggga
cagtattccaacttagaactgtaaaaggttgttattactattataatgat
ggtattttctgtacaagctagacagtaagtgtcaacttttatagtgtaaa
atgctatgatccacattaaaattataggggaaaatagagcccatttgttt
tagtgtcaactgcactgttcaagtcaaattcattttaaaaggtcatcgcc
aatcacagaaaatacaaaacaatctgaagtcttggagaaattttgtgagc
cacaaaaagagcaagctcaggtcatggcgttgacagtttccctcgacaac
actcaggcccaatttagtgtatttgccacttattctgagcctcattctcc
attctgcatcacccggattttaattattgccagtttataactcttctttg
gatgtctaccaattaagtgacagtagtaaataccacaaagcaagtatggt
tgtttaatcctgtaagctgtattgattcttgaatgtgtggcaaccctttg
caggcaccaatttcagcagcatccctatcttctacccaatagatgcacat
tctattgtgataatctccaagtagtccttggtgttcaaaattgtgcctat
caaagacccattaggttagacaaagcaaatgagtcatcagattctgataa
caatatgcatgaacagtttggatagatggaaaggacaagttaaaacatat
tataggtgttgcatactggttacccaaaattcagtatcacgtatctagag
agagagacagcatagcaacaatgactagtttctatagagtgtacttagct
ggtgagaacttaattccacgattgttttaagaacctcattctattcaatt
cattcatttcccttattcttttattcagtaaaaagaatttatcatatatt
tctggcctggtgtagagaatttccacagagttggaaaattgaacatgtgt
gaattggcctagacaaggtcgtaagtttccgtattcaatatagaactcaa
aaccttccttctctctcccaaaatatat

agaaaaagcacagaaattactgaactatactttcgaatgaagaacaataa
agaaccccaaacacactaatgcatgaagaggaaaaataaatcaccaaagg
gaagaagatttgcctgtgttttagatgtgacctacaatgaagattaaggg
attagtttgttttaaattactattgtgatatacatgtgaccaaaaattaa
ctgatatttttgatgcatgatttgccagagtctagaggaaagacacgaaa
tgccatattactgctaacattgtgcgttgatggtgtgtacgttgctgaat
gtgaccgccatggtggagacagtgaaagtggtctgtttctagtataagtg
atggtggtggtggtggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_67764021_67765293
seq2: B6Ng01-325K15.b_44_1321 (reverse)

seq1  ATATAATTTTGGGGGA-AGAAGGAA-GTTTTGAGTTCTTATATTGATTAC  48
      |||| |||||||| || |||||||| ||||||||||| |||||||| |||
seq2  ATAT-ATTTTGGGAGAGAGAAGGAAGGTTTTGAGTTC-TATATTGAATAC  48

seq1  TGAACATCAGGACTTTGTCCTAGCCAACTCA-ACATGTTCATATTTCCAA  97
       |||  | | ||| |||||   ||||| ||| |||||||||  |||||||
seq2  GGAAACTTACGACCTTGTCTAGGCCAATTCACACATGTTCAATTTTCCAA  98

seq1  CTCCTGGTGAAATCTCCTACTACCA-GCCAG-AATATATGATAAATACTT  145
      || |||  |||||   |||| |||| ||||| |||||||||||||| |||
seq2  CT-CTGTGGAAATTCTCTAC-ACCAGGCCAGAAATATATGATAAATTCTT  146

seq1  TTTACTGA--TAAAGAATAAGGGAAATGAATGAA-TGGATAGAATGA-GT  191
      ||||||||   ||||||||||||||||||||||| || ||||||||| ||
seq2  TTTACTGAATAAAAGAATAAGGGAAATGAATGAATTGAATAGAATGAGGT  196

seq1  TCTTAAACAAATCGT-GAATTAAGTTCTTCACAGCTAAGTACACTCTATA  240
      |||||||  |||||| ||||||||||||   |||||||||||||||||||
seq2  TCTTAAAACAATCGTGGAATTAAGTTCTCACCAGCTAAGTACACTCTATA  246

seq1  GAAACTAGTCATTGTGCCTATGCTGTCTCTCTCTCTAGATACGTGATACT  290
      |||||||||||||||  |||||||||||||||||||||||||||||||||
seq2  GAAACTAGTCATTGTTGCTATGCTGTCTCTCTCTCTAGATACGTGATACT  296

seq1  GAATTTTGGGTAACCAGTATGCAACACCTATAATATGTTTTAACTTGTCC  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTGGGTAACCAGTATGCAACACCTATAATATGTTTTAACTTGTCC  346

seq1  CTTCCATCTATCCAAACTGTTCATGCATATTGTTATCAGAATCTGATGAC  390
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATCTATCCAAACTGTTCATGCATATTGTTATCAGAATCTGATGAC  396

seq1  TCATTTGCTTTGTCTAACCTAATGGGTCTTTGATAGGCACAATTTTGAAC  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGCTTTGTCTAACCTAATGGGTCTTTGATAGGCACAATTTTGAAC  446

seq1  ACCAAGGACTACTTGGAGATTATCACAATAGAATGTGCATCTATTGGGTA  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGGACTACTTGGAGATTATCACAATAGAATGTGCATCTATTGGGTA  496

seq1  GAAGATAGGGATGCTGCTGAAATTGGTGCCTGCAAAGGGTTGCCACACAT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GAAGATAGGGATGCTGCTGAAATTGGTGCCTGCAAAGGGTTGCCACACA-  545

seq1  TTCAAGAATCAATACAGCTTACAGGATTAAACAACCATACTTGCTTTGTG  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGAATCAATACAGCTTACAGGATTAAACAACCATACTTGCTTTGTG  595

seq1  GTATTTACTACTGTCACTTAATTGGTAGACATCCAAAGAAGAGTTATAAA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTACTACTGTCACTTAATTGGTAGACATCCAAAGAAGAGTTATAAA  645

seq1  CTGGCAATAATTAAAATCCGGGTGATGCAGAATGGAGAATGAGGCTCAGA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCAATAATTAAAATCCGGGTGATGCAGAATGGAGAATGAGGCTCAGA  695

seq1  ATAAGTGGCAAATACACTAAATTGGGCCTGAGTGTTGTCGAGGGAAACTG  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTGGCAAATACACTAAATTGGGCCTGAGTGTTGTCGAGGGAAACTG  745

seq1  TCAACGCCATGACCTGAGCTTGCTCTTTTTGTGGCTCACAAAATTTCTCC  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACGCCATGACCTGAGCTTGCTCTTTTTGTGGCTCACAAAATTTCTCC  795

seq1  AAGACTTCAGATTGTTTTGTATTTTCTGTGATTGGCGATGACCTTTTAAA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTTCAGATTGTTTTGTATTTTCTGTGATTGGCGATGACCTTTTAAA  845

seq1  ATGAATTTGACTTGAACAGTGCAGTTGACACTAAAACAAATGGGCTCTAT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTTGACTTGAACAGTGCAGTTGACACTAAAACAAATGGGCTCTAT  895

seq1  TTTCCCCTATAATTTTAATGTGGATCATAGCATTTTACACTATAAAAGTT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCTATAATTTTAATGTGGATCATAGCATTTTACACTATAAAAGTT  945

seq1  GACACTTACTGTCTAGCTTGTACAGAAAATACCATCATTATAATAGTAAT  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTTACTGTCTAGCTTGTACAGAAAATACCATCATTATAATAGTAAT  995

seq1  AACAACCTTTTACAGTTCTAAGTTGGAATACTGTCCCCTAAAGAGATACG  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACCTTTTACAGTTCTAAGTTGGAATACTGTCCCCTAAAGAGATACG  1045

seq1  TTGACATCTCAACCCCCGGATCCCTATGACTGTGATCCCATTTGGAAGCA  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACATCTCAACCCCCGGATCCCTATGACTGTGATCCCATTTGGAAGCA  1095

seq1  GAATTTTTACATAAGGCAAAAAGTTAAGCAGATGTTATTCTTGAAAAAAT  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTTACATAAGGCAAAAAGTTAAGCAGATGTTATTCTTGAAAAAAT  1145

seq1  AAAAAGTGGTGTTATTATAAGGAGAGAGAATACTCCAGGTGTAGATCCAG  1190
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGTGGTGTTATTATAAGGAGAGAGAATACTCCAGGTGTAGATCCAG  1195

seq1  GTGTAGAGTCACCTAGAGAAAGATGCTATGGGATATGACAAGGGTAGAAA  1240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGAGTCACCTAGAGAAAGATGCTATGGGATATGACAAGGGTAGAAA  1245

seq1  TTAGAGCACAGCAACTGTATAACCATGGAATTC  1273
      |||||||||||||||||||||||||||||||||
seq2  TTAGAGCACAGCAACTGTATAACCATGGAATTC  1278


seq1: chr15_67627401_67627774
seq2: B6Ng01-325K15.g_67_440

seq1  GAATTCAGAAAAAGCACAGAAATTACTGAACTATACTTTCGAATGAAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAAAAAGCACAGAAATTACTGAACTATACTTTCGAATGAAGAA  50

seq1  CAATAAAGAACCCCAAACACACTAATGCATGAAGAGGAAAAATAAATCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAAGAACCCCAAACACACTAATGCATGAAGAGGAAAAATAAATCAC  100

seq1  CAAAGGGAAGAAGATTTGCCTGTGTTTTAGATGTGACCTACAATGAAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGGAAGAAGATTTGCCTGTGTTTTAGATGTGACCTACAATGAAGAT  150

seq1  TAAGGGATTAGTTTGTTTTAAATTACTATTGTGATATACATGTGACCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGATTAGTTTGTTTTAAATTACTATTGTGATATACATGTGACCAAA  200

seq1  AATTAACTGATATTTTTGATGCATGATTTGCCAGAGTCTAGAGGAAAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAACTGATATTTTTGATGCATGATTTGCCAGAGTCTAGAGGAAAGAC  250

seq1  ACGAAATGCCATATTACTGCTAACATTGTGCGTTGATGGTGTGTACGTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAAATGCCATATTACTGCTAACATTGTGCGTTGATGGTGTGTACGTTG  300

seq1  CTGAATGTGACCGCCATGGTGGAGACAGTGAAAGTGGTCTGTTTCTAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATGTGACCGCCATGGTGGAGACAGTGAAAGTGGTCTGTTTCTAGTA  350

seq1  TAAGTGATGGTGGTGGTGGTGGTG  374
      ||||||||||||||||||||||||
seq2  TAAGTGATGGTGGTGGTGGTGGTG  374


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