BAC Information

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BAC

Clone NameB6Ng01-326F11
Chromosome15 (Build37)
Map Location 93,431,412 - 93,537,537
singlet/doubletdoublet
Overlap geneZfp42-ps1, LOC100042627
Upstream genePdzrn4, LOC100042552, LOC100043283, Glt8d3, Yaf2, Zcrb1, Pphln1, LOC627623, Prickle1
Downstream geneLOC100042631, D630010B17Rik, Adamts20, Pus7l, Irak4, Twf1, Tmem117
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326F11.bB6Ng01-326F11.g
ACCGA114173GA114174
length1,222868
definitionB6Ng01-326F11.b B6Ng01-326F11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,536,306 - 93,537,537)(93,431,412 - 93,432,278)
sequence
gaattcacaacaggtaaggtgagggcaggagaaccgcatccacgacacta
cttacagtgccctcacctttccagaaacatcgtatttactgattcctcta
ctccatagttctgcttttaatgggggaggaggaccagatctctgtaagcc
tttagaaacatcgccccccccaccccaacaaagtatagatttcctgaagg
gtgagccaacccaagccctgctcaggaaatgccaacttgacagctttcag
cacaatccaatggtgtgccaaaagtcctcatcccatgagttagacgtgtt
ctccaattccttattgcctggccaggactaaagacaggaagtgagagcac
tcacacactgcagagatccctcgtacattcacgctgcagaaccagacgtt
ccagatgaaatcataactgtctcttactgtgtgggatttgacttctccaa
gaaatactcgccaggcatcggaatacaaaaggcacaggacgtcctccctg
ccacccaacacgctctcaggctgagcagctgatgtgggatttctctaaca
agcatcagaaatggggagggctctgcgctggagttcagggaggctgtgag
agagaacaccacatctggcccacgcatcttccccaaggggctcaccgtga
actccccaaaacctttctaacagcagaagtcactgtcaattttacagatg
aggaaaccaggaactctagaggcccagtgtcttgccccagccaagtatgt
gtgttcagaaggggagttttgatcacattacaccactgagcatctaggca
tgacagtttttatccctagagcagtcatttattgaacaagtcgtaaaaga
ccaaaaaggggcctgggccatttcgaaatgttcccaagttaatctcagga
ctagtttagaactgaagggatttgattcgataattttcagtctctattgt
aatgttgcctttaaatcacaaaattatgagctctgcttttccctttggag
aacatcagacagtcccccgccccttatccaaggatctttctgtcatacaa
actgcgtttgaccttcactctacccagctgggaaatcatgacagcgcagc
ccattagcttagcagcacgttcattttcttctttatagaagtactctttc
cattcagttcttcattaggaaacattaatggacgctgctgcattggacca
ggcaataaacataatcccaacc
gaattcagataaggcagtggtagcaagaggcttagaggacactgggaatt
ggctcccacatcagccccatcccggcaggatgtggtttcctcataggtga
gaggcactgatggcttggaaattacccttttatgctgggtgctagccatg
tgaccctgtgcgacattagcaaagtgatctgtcactcatgatgcggttga
gcaaaatgcacaaaggaaatcagtttactaacttaactctattaggttaa
aaggcaaatggagatcgaaacaataatcaaagggtaatatttaattcatg
ggcttagttctctgacagcgactttctcttttaatttactttctatgtgg
caaagtaatgaagtttgaggaagcttaaagaaaaaaatggaggaaatcct
tgtagcacaccactcaacgcaatcctttctagagaactcccgaattcaaa
cccactattttcttgctaagagaagaattctattttgcctaaaagcagag
taattcaatatgaggaagaaaaggaaaaaagcccacaaagagactcaaag
tgattcagagcaatatactttcttcaagtgaacggcttgggctggagaaa
tggtgggccagactctgcctgccgattggtcttctgcccttgcaagccac
gtgacatctttgcaagtcacgtgacatctttgcaagtcacgtgacatctt
gtttcatcagaaactgggatttgtccattgacggttacagacctggtctc
ttcctaactcgtcaaatgggagtaaatcagtaggcgatcccactggctgg
gcgggaagaaatggatatacgtcttagctcagtgattcgggagtcaggag
aggtgtgggggggtgagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_93536306_93537537
seq2: B6Ng01-326F11.b_50_1271 (reverse)

seq1  GGTTGG--TTATGTTTTATTGCCTGG-CTCATGCAGCAAGCTGTCAATAA  47
      ||||||  ||||| |||||||||||| |  ||||||| ||| ||| ||  
seq2  GGTTGGGATTATG-TTTATTGCCTGGTCCAATGCAGC-AGC-GTCCAT-T  46

seq1  AATGTTTCTTAATGAAGGACTGAAT-GAAAGAGTACCTTCTATA---GAG  93
      |||||||| |||||||| ||||||| ||||||||| ||||||||    ||
seq2  AATGTTTCCTAATGAAGAACTGAATGGAAAGAGTA-CTTCTATAAAGAAG  95

seq1  AAAATG-ACGTGCTGCTAAGGCCTTCATGGGCCTGCGCTGTCATGATTTC  142
      |||||| |||||||||||||    | ||||| ||||||||||||||||||
seq2  AAAATGAACGTGCTGCTAAG---CTAATGGG-CTGCGCTGTCATGATTTC  141

seq1  CCAGCTGGGGTAGAGGTGAAGGTCAAACGCAGTTTGTATGAACAGGAAAG  192
      |||||| ||||||| ||||||||||||||||||||||||| ||| |||||
seq2  CCAGCT-GGGTAGA-GTGAAGGTCAAACGCAGTTTGTATG-ACA-GAAAG  187

seq1  ATCCTTGGATAAGGGGCGGGGGACTGTCTTGATGGTTTCTCCAAAGGGAA  242
      |||||||||||||||||||||||||||| |||||  ||||||||||||||
seq2  ATCCTTGGATAAGGGGCGGGGGACTGTC-TGATG--TTCTCCAAAGGGAA  234

seq1  AAGCAGAGCTCATAATTTTGTGATTTAAAAGGCAACATTACAATAGAGAC  292
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AAGCAGAGCTCATAATTTTGTGATTT-AAAGGCAACATTACAATAGAGAC  283

seq1  TGAAAATTATCGAATCAAATCCCTTCAGTTCTAAACTAGTCCCTGAGATT  342
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TGAAAATTATCGAATCAAATCCCTTCAGTTCTAAACTAGT-CCTGAGATT  332

seq1  AACTTGGGAACATTTCGAAATGGCCCAGGCCCCTTTTTGGTCTTTTACGA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGGGAACATTTCGAAATGGCCCAGGCCCCTTTTTGGTCTTTTACGA  382

seq1  CTTGTTCAATAAATGACTGCTCTAGGGATAAAAACTGTCATGCCTAGATG  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTCAATAAATGACTGCTCTAGGGATAAAAACTGTCATGCCTAGATG  432

seq1  CTCAGTGGTGTAATGTGATCAAAACTCCCCTTCTGAACACACATACTTGG  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTGGTGTAATGTGATCAAAACTCCCCTTCTGAACACACATACTTGG  482

seq1  CTGGGGCAAGACACTGGGCCTCTAGAGTTCCTGGTTTCCTCATCTGTAAA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGCAAGACACTGGGCCTCTAGAGTTCCTGGTTTCCTCATCTGTAAA  532

seq1  ATTGACAGTGACTTCTGCTGTTAGAAAGGTTTTGGGGAGTTCACGGTGAG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGACAGTGACTTCTGCTGTTAGAAAGGTTTTGGGGAGTTCACGGTGAG  582

seq1  CCCCTTGGGGAAGATGCGTGGGCCAGATGTGGTGTTCTCTCTCACAGCCT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTGGGGAAGATGCGTGGGCCAGATGTGGTGTTCTCTCTCACAGCCT  632

seq1  CCCTGAACTCCAGCGCAGAGCCCTCCCCATTTCTGATGCTTGTTAGAGAA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAACTCCAGCGCAGAGCCCTCCCCATTTCTGATGCTTGTTAGAGAA  682

seq1  ATCCCACATCAGCTGCTCAGCCTGAGAGCGTGTTGGGTGGCAGGGAGGAC  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCACATCAGCTGCTCAGCCTGAGAGCGTGTTGGGTGGCAGGGAGGAC  732

seq1  GTCCTGTGCCTTTTGTATTCCGATGCCTGGCGAGTATTTCTTGGAGAAGT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGTGCCTTTTGTATTCCGATGCCTGGCGAGTATTTCTTGGAGAAGT  782

seq1  CAAATCCCACACAGTAAGAGACAGTTATGATTTCATCTGGAACGTCTGGT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCCCACACAGTAAGAGACAGTTATGATTTCATCTGGAACGTCTGGT  832

seq1  TCTGCAGCGTGAATGTACGAGGGATCTCTGCAGTGTGTGAGTGCTCTCAC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAGCGTGAATGTACGAGGGATCTCTGCAGTGTGTGAGTGCTCTCAC  882

seq1  TTCCTGTCTTTAGTCCTGGCCAGGCAATAAGGAATTGGAGAACACGTCTA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTCTTTAGTCCTGGCCAGGCAATAAGGAATTGGAGAACACGTCTA  932

seq1  ACTCATGGGATGAGGACTTTTGGCACACCATTGGATTGTGCTGAAAGCTG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATGGGATGAGGACTTTTGGCACACCATTGGATTGTGCTGAAAGCTG  982

seq1  TCAAGTTGGCATTTCCTGAGCAGGGCTTGGGTTGGCTCACCCTTCAGGAA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTTGGCATTTCCTGAGCAGGGCTTGGGTTGGCTCACCCTTCAGGAA  1032

seq1  ATCTATACTTTGTTGGGGTGGGGGGGGCGATGTTTCTAAAGGCTTACAGA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATACTTTGTTGGGGTGGGGGGGGCGATGTTTCTAAAGGCTTACAGA  1082

seq1  GATCTGGTCCTCCTCCCCCATTAAAAGCAGAACTATGGAGTAGAGGAATC  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGGTCCTCCTCCCCCATTAAAAGCAGAACTATGGAGTAGAGGAATC  1132

seq1  AGTAAATACGATGTTTCTGGAAAGGTGAGGGCACTGTAAGTAGTGTCGTG  1192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAATACGATGTTTCTGGAAAGGTGAGGGCACTGTAAGTAGTGTCGTG  1182

seq1  GATGCGGTTCTCCTGCCCTCACCTTACCTGTTGTGAATTC  1232
      ||||||||||||||||||||||||||||||||||||||||
seq2  GATGCGGTTCTCCTGCCCTCACCTTACCTGTTGTGAATTC  1222

seq1: chr15_93431412_93432278
seq2: B6Ng01-326F11.g_67_934

seq1  GAATTCAGATAAGGCAGTGGTAGCAAGAGGCTTAGAGGACACTGGGAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATAAGGCAGTGGTAGCAAGAGGCTTAGAGGACACTGGGAATT  50

seq1  GGCTCCCACATCAGCCCCATCCCGGCAGGATGTGGTTTCCTCATAGGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCCACATCAGCCCCATCCCGGCAGGATGTGGTTTCCTCATAGGTGA  100

seq1  GAGGCACTGATGGCTTGGAAATTACCCTTTTATGCTGGGTGCTAGCCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCACTGATGGCTTGGAAATTACCCTTTTATGCTGGGTGCTAGCCATG  150

seq1  TGACCCTGTGCGACATTAGCAAAGTGATCTGTCACTCATGATGCGGTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCTGTGCGACATTAGCAAAGTGATCTGTCACTCATGATGCGGTTGA  200

seq1  GCAAAATGCACAAAGGAAATCAGTTTACTAACTTAACTCTATTAGGTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAATGCACAAAGGAAATCAGTTTACTAACTTAACTCTATTAGGTTAA  250

seq1  AAGGCAAATGGAGATCGAAACAATAATCAAAGGGTAATATTTAATTCATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAAATGGAGATCGAAACAATAATCAAAGGGTAATATTTAATTCATG  300

seq1  GGCTTAGTTCTCTGACAGCGACTTTCTCTTTTAATTTACTTTCTATGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTAGTTCTCTGACAGCGACTTTCTCTTTTAATTTACTTTCTATGTGG  350

seq1  CAAAGTAATGAAGTTTGAGGAAGCTTAAAGAAAAAAATGGAGGAAATCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTAATGAAGTTTGAGGAAGCTTAAAGAAAAAAATGGAGGAAATCCT  400

seq1  TGTAGCACACCACTCAACGCAATCCTTTCTAGAGAACTCCCGAATTCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCACACCACTCAACGCAATCCTTTCTAGAGAACTCCCGAATTCAAA  450

seq1  CCCACTATTTTCTTGCTAAGAGAAGAATTCTATTTTGCCTAAAAGCAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTATTTTCTTGCTAAGAGAAGAATTCTATTTTGCCTAAAAGCAGAG  500

seq1  TAATTCAATATGAGGAAGAAAAGGAAAAAAGCCCACAAAGAGACTCAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCAATATGAGGAAGAAAAGGAAAAAAGCCCACAAAGAGACTCAAAG  550

seq1  TGATTCAGAGCAATATACTTTCTTCAAGTGAACGGCTTGGGCTGGAGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCAGAGCAATATACTTTCTTCAAGTGAACGGCTTGGGCTGGAGAAA  600

seq1  TGGTGGGCCAGACTCTGCCTGCCGATTGGTCTTCTGCCCTTGCAAGCCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGGCCAGACTCTGCCTGCCGATTGGTCTTCTGCCCTTGCAAGCCAC  650

seq1  GTGACATCTTTGCAAGTCACGTGACATCTTTGCAAGTCACGTGACATCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACATCTTTGCAAGTCACGTGACATCTTTGCAAGTCACGTGACATCTT  700

seq1  GTTTCATCAGAAACTGGGATTTGTCCATTGACGGTTACAGACCTGGTCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCATCAGAAACTGGGATTTGTCCATTGACGGTTACAGACCTGGTCTC  750

seq1  TTCCTAACTCGTCAAATGGGAGTAAATCAGTAGGCGATCCCACTGGCTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAACTCGTCAAATGGGAGTAAATCAGTAGGCGATCCCACTGGCTGG  800

seq1  GCGGGAAGAAATGGATATACGTCTTAGCTCAGTGATTCGGGAGTCAGGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGGAAGAAATGGATATACGTCTTAGCTCAGTGATTCGGGAGTCAGGAG  850

seq1  AGGTGT-GGGGGGTGAGG  867
      |||||| |||||||||||
seq2  AGGTGTGGGGGGGTGAGG  868