BAC Information

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BAC

Clone NameB6Ng01-328B05
Chromosome15 (Build37)
Map Location 73,716,145 - 73,866,597
singlet/doubletdoublet
Overlap geneLOC100040966
Upstream gene1810044A24Rik, LOC100041120, Chrac1, Eif2c2, Ptk2, LOC666053, LOC100040929, Dennd3, Slc45a4, Gpr20, LOC100040946, pPtp4a3, Gm628, LOC100041273, EG625276
Downstream geneEG666113, LOC100041307, LOC100040984, Bai1, 1700016M24Rik, Arc, Jrk, 4933427E11Rik, Psca, 4930572J05Rik, Slurp1, Lypd2, 2300005B03Rik, Lynx1, Ly6d, D730001G18Rik, Ly6k, Gml, Hemt1, Cyp11b1, Cyp11b2, 2010109I03Rik, LOC625653, Ly6e, Ly6i, LOC666240, LOC100041528, Ly6a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-328B05.bB6Ng01-328B05.g
ACCGA115435GA115436
length1,123880
definitionB6Ng01-328B05.b B6Ng01-328B05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,865,465 - 73,866,597)(73,716,145 - 73,717,019)
sequence
gaattctctatccatcaggagataagttggcacacaggcaataatggagt
agataggacactcatgcagaagggtttggggtgggacctgggatgaactg
ggattcagagatgcttcccaggagaatggaggtacctacgggacactctt
gtcttttgtgtggagaagctcctgatgggggcacaggtcaaagacttgtc
catatcctcttccagacagagataatagaagctgggcacctggtcatagt
aagaaagcagctgccaggctgtctgaccatgagagatgcctttgatcctt
gcaggggctctggaaggctgggctggtagaacctgagtgagggctttgcc
ctgggaggctgactctaggcttctccatcagtcagcaaagcccaggctgc
ctcatctcctgggcccttcatctgggatttgtagaatgagatgtgatcca
ctgtgagttctgctgatggggaagtcatttttctccctccctggagaaat
taaaggtatgaagcttatggctggcaccataccaattggctcagcataaa
aacatcaagagcaaaagcctcgcagaagtgttctggatttaggcaaagct
tggagacttcctgacagggtgagatatggtcagacacagataccaggcac
cccagcgacctgccagggtgccaggctctgcctttttcatgatctctgcc
cctctccctccactcttcttttggtcacaagaggatgaaatggctgtcta
ctggagtgtggaaaaatagacgtgaaacatttggaaaagcgttgagtaaa
tattctatttccagatgccattgttaaaataattacacttattttaatag
acttcatttttcagaacagttttaggttttaggaaatgtgtgcaaaaaaa
aaaaaaaaaaaacaatctgaaggtattttaacagatgattaaacagtaat
tgtcctagagaaccgggaagcaggcccctggccagcatattttctgaggc
ctcagacccagtcacctcaggctctgtgtctggggatactacatgacaga
gagtccagagtagccacttcccaggtctctttttataattctgagacacc
cccagagaatgtccgtggcaccc
gaattcatgtctcttgctgccgttagaaggctggagcagtaggttctaca
cgttggagctggccaggctcaaggaagtagaacatcccaggtcccacccc
ctcatctctacacatagcctctatctctgcatgccaggactcacagaaag
caggaaataggggacacaccctatcctgtatggagagggttgtagcccag
agggggaatgtatgtgatgggggatgtgtctcattcataggagcctagag
ggcaggctgtatgtggagacaacctgatagtggagtattgagaactttgt
tgggaatggaagtctatgtaggtcatagcgaacagcctatgtaaccatag
tgacgtgccaaccagtgctacaggctgaactaacccaggcaggggacatg
ccagaggaaggaggtatcatccattggagggccttgaagtggccttgaag
gataggaaacctggaagtgttggctctgctgcttttttgatcatgaccct
tgtgtcccagctccactagcctctctcttccccagatgacaaccatgttg
ttttcaaggtcatgcctttgtatctaggcataaggtgacagtggtacagt
agtcccagaagcctcctgggtctgtccttgtctcctagatcctgaactct
ccttccaaagcctcagttcagctcatgggctcagatttggggtctgacta
cgggaggtgccctgcatcacagggacccgggtagcatgcctgtctagcta
tacagtgtgcatctgtttggtatagcacgtggtgtcagtgaggctccatg
tgttccccgtactggtacttaggcctagctaactttttacccagcctgtc
cttggttatgggggatatccccatggactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_73865465_73866597
seq2: B6Ng01-328B05.b_47_1169 (reverse)

seq1  GGGTGCAACGGGACA-TCTCTGGGGGTGGTCCTCAGAATTTATAAAAGAG  49
      |||||| || ||||| ||||||||||||   |||||||||   |||||||
seq2  GGGTGCCAC-GGACATTCTCTGGGGGTG--TCTCAGAATTATAAAAAGAG  47

seq1  ACCCTGGGAAGTGGCTACTCTGGGACTCTCTGTCATGTTAGTATCCCCAA  99
      | ||||||||||||||||||| ||||||||||||||| |||||||||| |
seq2  A-CCTGGGAAGTGGCTACTCT-GGACTCTCTGTCATG-TAGTATCCCC-A  93

seq1  GACACAGAGCCTTGAGGTTGACTGGGTCTGAGGCCTCAG-AAATATGCTG  148
      ||||||||||| ||||| ||||||||||||||||||||| ||||||||||
seq2  GACACAGAGCC-TGAGG-TGACTGGGTCTGAGGCCTCAGAAAATATGCTG  141

seq1  GCCAGGGGCCCTGCTTCCCGGTTCTCCTAGGACAATTACTGTTTAATCAT  198
      |||||||| |||||||||||||||| ||||||||||||||||||||||||
seq2  GCCAGGGG-CCTGCTTCCCGGTTCT-CTAGGACAATTACTGTTTAATCAT  189

seq1  CTGTTAAAATACCTTCAGATTGTTTTTTTTTTTTTTTTTTTTGCACACAT  248
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CTGTTAAAATACCTTCAGATTG-TTTTTTTTTTTTTTTTTTTGCACACAT  238

seq1  TTCCTAAAACCTAAAACTGTTCTGAAAAATGAAGTCTATTAAAATAAGTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAAAACCTAAAACTGTTCTGAAAAATGAAGTCTATTAAAATAAGTG  288

seq1  TAATTATTTTAACAATGGCATCTGGAAATAGAATATTTACTCAACGCTTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATTTTAACAATGGCATCTGGAAATAGAATATTTACTCAACGCTTT  338

seq1  TCCAAATGTTTCACGTCTATTTTTCCACACTCCAGTAGACAGCCATTTCA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAATGTTTCACGTCTATTTTTCCACACTCCAGTAGACAGCCATTTCA  388

seq1  TCCTCTTGTGACCAAAAGAAGAGTGGAGGGAGAGGGGCAGAGATCATGAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTGTGACCAAAAGAAGAGTGGAGGGAGAGGGGCAGAGATCATGAA  438

seq1  AAAGGCAGAGCCTGGCACCCTGGCAGGTCGCTGGGGTGCCTGGTATCTGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCAGAGCCTGGCACCCTGGCAGGTCGCTGGGGTGCCTGGTATCTGT  488

seq1  GTCTGACCATATCTCACCCTGTCAGGAAGTCTCCAAGCTTTGCCTAAATC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGACCATATCTCACCCTGTCAGGAAGTCTCCAAGCTTTGCCTAAATC  538

seq1  CAGAACACTTCTGCGAGGCTTTTGCTCTTGATGTTTTTATGCTGAGCCAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACACTTCTGCGAGGCTTTTGCTCTTGATGTTTTTATGCTGAGCCAA  588

seq1  TTGGTATGGTGCCAGCCATAAGCTTCATACCTTTAATTTCTCCAGGGAGG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTATGGTGCCAGCCATAAGCTTCATACCTTTAATTTCTCCAGGGAGG  638

seq1  GAGAAAAATGACTTCCCCATCAGCAGAACTCACAGTGGATCACATCTCAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAAATGACTTCCCCATCAGCAGAACTCACAGTGGATCACATCTCAT  688

seq1  TCTACAAATCCCAGATGAAGGGCCCAGGAGATGAGGCAGCCTGGGCTTTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAAATCCCAGATGAAGGGCCCAGGAGATGAGGCAGCCTGGGCTTTG  738

seq1  CTGACTGATGGAGAAGCCTAGAGTCAGCCTCCCAGGGCAAAGCCCTCACT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTGATGGAGAAGCCTAGAGTCAGCCTCCCAGGGCAAAGCCCTCACT  788

seq1  CAGGTTCTACCAGCCCAGCCTTCCAGAGCCCCTGCAAGGATCAAAGGCAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTCTACCAGCCCAGCCTTCCAGAGCCCCTGCAAGGATCAAAGGCAT  838

seq1  CTCTCATGGTCAGACAGCCTGGCAGCTGCTTTCTTACTATGACCAGGTGC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCATGGTCAGACAGCCTGGCAGCTGCTTTCTTACTATGACCAGGTGC  888

seq1  CCAGCTTCTATTATCTCTGTCTGGAAGAGGATATGGACAAGTCTTTGACC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTTCTATTATCTCTGTCTGGAAGAGGATATGGACAAGTCTTTGACC  938

seq1  TGTGCCCCCATCAGGAGCTTCTCCACACAAAAGACAAGAGTGTCCCGTAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCCCCATCAGGAGCTTCTCCACACAAAAGACAAGAGTGTCCCGTAG  988

seq1  GTACCTCCATTCTCCTGGGAAGCATCTCTGAATCCCAGTTCATCCCAGGT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCTCCATTCTCCTGGGAAGCATCTCTGAATCCCAGTTCATCCCAGGT  1038

seq1  CCCACCCCAAACCCTTCTGCATGAGTGTCCTATCTACTCCATTATTGCCT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCCCAAACCCTTCTGCATGAGTGTCCTATCTACTCCATTATTGCCT  1088

seq1  GTGTGCCAACTTATCTCCTGATGGATAGAGAATTC  1133
      |||||||||||||||||||||||||||||||||||
seq2  GTGTGCCAACTTATCTCCTGATGGATAGAGAATTC  1123

seq1: chr15_73716145_73717019
seq2: B6Ng01-328B05.g_67_946

seq1  GAATTCATGTCTCTTGCTGCCGTTAGAAGGCTGGAGCAGTAGGTTCTACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTCTCTTGCTGCCGTTAGAAGGCTGGAGCAGTAGGTTCTACA  50

seq1  CGTTGGAGCTGGCCAGGCTCAAGGAAGTAGAACATCCCAGGTCCCACCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTGGAGCTGGCCAGGCTCAAGGAAGTAGAACATCCCAGGTCCCACCCC  100

seq1  CTCATCTCTACACATAGCCTCTATCTCTGCATGCCAGGACTCACAGAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCTCTACACATAGCCTCTATCTCTGCATGCCAGGACTCACAGAAAG  150

seq1  CAGGAAATAGGGGACACACCCTATCCTGTATGGAGAGGGTTGTAGCCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAATAGGGGACACACCCTATCCTGTATGGAGAGGGTTGTAGCCCAG  200

seq1  AGGGGGAATGTATGTGATGGGGGATGTGTCTCATTCATAGGAGCCTAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGAATGTATGTGATGGGGGATGTGTCTCATTCATAGGAGCCTAGAG  250

seq1  GGCAGGCTGTATGTGGAGACAACCTGATAGTGGAGTATTGAGAACTTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGCTGTATGTGGAGACAACCTGATAGTGGAGTATTGAGAACTTTGT  300

seq1  TGGGAATGGAAGTCTATGTAGGTCATAGCGAACAGCCTATGTAACCATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAATGGAAGTCTATGTAGGTCATAGCGAACAGCCTATGTAACCATAG  350

seq1  TGACGTGCCAACCAGTGCTACAGGCTGAACTAACCCAGGCAGGGGACATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACGTGCCAACCAGTGCTACAGGCTGAACTAACCCAGGCAGGGGACATG  400

seq1  CCAGAGGAAGGAGGTATCATCCATTGGAGGGCCTTGAAGTGGCCTTGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGGAAGGAGGTATCATCCATTGGAGGGCCTTGAAGTGGCCTTGAAG  450

seq1  GATAGGAAACCTGGAAGTGTTGGCTCTGCTGCTTTTTTGATCATGACCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGAAACCTGGAAGTGTTGGCTCTGCTGCTTTTTTGATCATGACCCT  500

seq1  TGTGTCCCAGCTCCACTAGCCTCTCTCTTCCCCAGATGACAACCATGTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCCCAGCTCCACTAGCCTCTCTCTTCCCCAGATGACAACCATGTTG  550

seq1  TTTTCAAGGTCATGCCTTTGTATCTAGGCATAAGGTGACAGTGGTACAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAAGGTCATGCCTTTGTATCTAGGCATAAGGTGACAGTGGTACAGT  600

seq1  AGTCCCAGAAGCCTCCTGGGTCTGTCCTTGTCTCCTAGATCCTGAACTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCAGAAGCCTCCTGGGTCTGTCCTTGTCTCCTAGATCCTGAACTCT  650

seq1  CCTTCCAAAGCCTCAGTTCAGCTCATGGGCTCAGATTT-GGGTCTGACTA  699
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CCTTCCAAAGCCTCAGTTCAGCTCATGGGCTCAGATTTGGGGTCTGACTA  700

seq1  CGGGAGGTG-CCTGCATCACAGGGACCCGGGTAGCATGCCTGTCTAGCTA  748
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CGGGAGGTGCCCTGCATCACAGGGACCCGGGTAGCATGCCTGTCTAGCTA  750

seq1  TACAGTGTGCATCTG-TTGGTATAGCAGGTGGTGTCAGTGAGGCTCCATG  797
      ||||||||||||||| ||||||||||| ||||||||||||||||||||||
seq2  TACAGTGTGCATCTGTTTGGTATAGCACGTGGTGTCAGTGAGGCTCCATG  800

seq1  TGTTCACGGCACTGGTACCTAGGCCCAGCTAACCTTTTACCCAG-CTGTC  846
      ||||| | | |||||||| |||||| ||||||| |||||||||| |||||
seq2  TGTTCCCCGTACTGGTACTTAGGCCTAGCTAACTTTTTACCCAGCCTGTC  850

seq1  C-TGTCTATGGGGGATATCCCCATGGACTT  875
      | ||  ||||||||||||||||||||||||
seq2  CTTGGTTATGGGGGATATCCCCATGGACTT  880