BAC Information

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BAC

Clone NameB6Ng01-328E11
Chromosome15 (Build37)
Map Location 70,475,528 - 70,476,762
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383050
Downstream geneLOC383051, 1700010C24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-328E11.bB6Ng01-328E11.g
ACCGA115589GA115590
length1,2071,204
definitionB6Ng01-328E11.b B6Ng01-328E11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgatgctagttctggataaaccataagactatacatttatccaa
tttgcgctctatgaatgtttctctggaattgcaaactccccatgaatgag
ctcactactggaatggctttcatcagaagacacgacatgagtgtcactca
ggctgtcataacctaaagttagaaccttcataaatctattccatacatga
aatatgagacaaatatctatctggtgacttagaaacagattttagatgtt
tgagattcactttgggcatagctggtaagcaatgcaaagaggtttctcag
tgtctccttctcaaagtgtactgcccattgtctcaccctgaatttttaac
tttctgtgatttttttttctgtgaactacaatatagaacaatttccccct
gaaccttccatagatgttctgtcttaaaatggaaaggaggcacaaagatc
cacaactgccattgcctctctgccaatgtttcaagcagctaacctgtgcg
taagcactgcccagatccatatagcaaggagggggagaaattcataaatg
agtatattgtgcaaatgtaattttatcagtcccactttgagcacctggaa
gtgctggcttttcttagatcagaggcactattcacagaatgtgttcagag
aatgaagctgattaataagaacaaaaatggtcagaatcatttcttaaaat
tccttaaaaatactgtttatggctatttatagatgcagaattcagattca
aaaagcaaggtgtgtgaatttaaagccagatagagcaaaggactaaataa
gcaacagccagttaattacatattcactcttatttttgaaatcacattta
gccacttcacttgagaacatctgtaagtttgttcctttaagcctcaaagc
ccatttatataagtacagggatgaaggtaaaatggcttccattcatgcaa
caagcctctaaaataattggatccttgaagtggactgtttcattttcctt
ctgtttataacagacatcttgaacaagatgaaattggtactcaggtggct
ttagtgccaggagtaagttttgcacatatgaagaatcggtaagctagtga
cctctgaataaactagattgttaaaattaaaacatcttcttaaaatgatc
tattatgattgtgtttctttaaactatctgccttattctagctaatttgt
taatgca

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtaaaaccactctggaaatcaatctggcgtttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggaaattatccccaaacc
taggattcccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgataccattgcatacactagcaagtttttattgaaa
ggacccagatgtagctgtctcttatgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagagctccca
atagaggagctagaggaagaacccaaggagctaaagggatctgcacctta
tagtgaacaacattatgaactaccagtaccccagagctcttaactctagc
tgcatatgtatcaaagatggcctagtcggcatcactgcaagagaggccca
tggacatgcaactttatatgcccagttacagggacgcaaggccaatgggg
agtgggtggtaggaattgaggcacacggtacatgcagatcacctggcgtt
tcga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_70475528_70476762
seq2: B6Ng01-328E11.b_46_1252 (reverse)

seq1  TGCATTTAAACAAATATAGCTAGGAATAAGGGCCAGATTAGTTTTAAAGG  50
      ||||||  ||||||| |||||| ||||||||  |||| ||| ||||||| 
seq2  TGCATT--AACAAAT-TAGCTA-GAATAAGG--CAGA-TAG-TTTAAAGA  42

seq1  AACACAAATTCATAAATAGATCATTTTTTAAAGAAGATGTTTTTAATTTT  100
      |||||||  |||| |||||||||||||   ||||||||||||| |   ||
seq2  AACACAA--TCAT-AATAGATCATTTT---AAGAAGATGTTTTAA---TT  83

seq1  TTAACAAATCTAGTTTTATTCAGA-GTCACTAAGCCTTACCGATTTCTTC  149
      ||||| ||||||| |||||||||| |||||||   |||||||| ||||||
seq2  TTAAC-AATCTAG-TTTATTCAGAGGTCACTA--GCTTACCGA-TTCTTC  128

seq1  CAATTAATGTGCAAAAACCTACTCCTGGCACTAAAGCCACCTGAGTACCA  199
        ||  |||||| ||||| |||||||||||||||||||||||||||||||
seq2  --AT--ATGTGC-AAAACTTACTCCTGGCACTAAAGCCACCTGAGTACCA  173

seq1  ATTTCATCTTGTTCAAGATGTCTGTTATAAACAGAAGGAAAAATGAAACA  249
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ATTTCATCTTGTTCAAGATGTCTGTTATAAACAGAAGG-AAAATGAAACA  222

seq1  GTCCACTTCAAGGATCCAATTATTTTTAGAGGCTTGTTGCATGAATGGAA  299
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GTCCACTTCAAGGATCCAATTA-TTTTAGAGGCTTGTTGCATGAATGGAA  271

seq1  GCCATTTTACCTTCATCCCTGTACTTATATAAATGGGCTTTGAGGCTTAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTTTACCTTCATCCCTGTACTTATATAAATGGGCTTTGAGGCTTAA  321

seq1  AGGAACAAACTTACAGATGTTCTCAAGTGAAGTGGCTAAATGTGATTTCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACAAACTTACAGATGTTCTCAAGTGAAGTGGCTAAATGTGATTTCA  371

seq1  AAAATAAGAGTGAATATGTAATTAACTGGCTGTTGCTTATTTAGTCCTTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAGAGTGAATATGTAATTAACTGGCTGTTGCTTATTTAGTCCTTT  421

seq1  GCTCTATCTGGCTTTAAATTCACACACCTTGCTTTTTGAATCTGAATTCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTATCTGGCTTTAAATTCACACACCTTGCTTTTTGAATCTGAATTCT  471

seq1  GCATCTATAAATAGCCATAAACAGTATTTTTAAGGAATTTTAAGAAATGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTATAAATAGCCATAAACAGTATTTTTAAGGAATTTTAAGAAATGA  521

seq1  TTCTGACCATTTTTGTTCTTATTAATCAGCTTCATTCTCTGAACACATTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGACCATTTTTGTTCTTATTAATCAGCTTCATTCTCTGAACACATTC  571

seq1  TGTGAATAGTGCCTCTGATCTAAGAAAAGCCAGCACTTCCAGGTGCTCAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAATAGTGCCTCTGATCTAAGAAAAGCCAGCACTTCCAGGTGCTCAA  621

seq1  AGTGGGACTGATAAAATTACATTTGCACAATATACTCATTTATGAATTTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGACTGATAAAATTACATTTGCACAATATACTCATTTATGAATTTC  671

seq1  TCCCCCTCCTTGCTATATGGATCTGGGCAGTGCTTACGCACAGGTTAGCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCTCCTTGCTATATGGATCTGGGCAGTGCTTACGCACAGGTTAGCT  721

seq1  GCTTGAAACATTGGCAGAGAGGCAATGGCAGTTGTGGATCTTTGTGCCTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGAAACATTGGCAGAGAGGCAATGGCAGTTGTGGATCTTTGTGCCTC  771

seq1  CTTTCCATTTTAAGACAGAACATCTATGGAAGGTTCAGGGGGAAATTGTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCATTTTAAGACAGAACATCTATGGAAGGTTCAGGGGGAAATTGTT  821

seq1  CTATATTGTAGTTCACAGAAAAAAAAATCACAGAAAGTTAAAAATTCAGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATTGTAGTTCACAGAAAAAAAAATCACAGAAAGTTAAAAATTCAGG  871

seq1  GTGAGACAATGGGCAGTACACTTTGAGAAGGAGACACTGAGAAACCTCTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGACAATGGGCAGTACACTTTGAGAAGGAGACACTGAGAAACCTCTT  921

seq1  TGCATTGCTTACCAGCTATGCCCAAAGTGAATCTCAAACATCTAAAATCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTGCTTACCAGCTATGCCCAAAGTGAATCTCAAACATCTAAAATCT  971

seq1  GTTTCTAAGTCACCAGATAGATATTTGTCTCATATTTCATGTATGGAATA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTAAGTCACCAGATAGATATTTGTCTCATATTTCATGTATGGAATA  1021

seq1  GATTTATGAAGGTTCTAACTTTAGGTTATGACAGCCTGAGTGACACTCAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTATGAAGGTTCTAACTTTAGGTTATGACAGCCTGAGTGACACTCAT  1071

seq1  GTCGTGTCTTCTGATGAAAGCCATTCCAGTAGTGAGCTCATTCATGGGGA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGTGTCTTCTGATGAAAGCCATTCCAGTAGTGAGCTCATTCATGGGGA  1121

seq1  GTTTGCAATTCCAGAGAAACATTCATAGAGCGCAAATTGGATAAATGTAT  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCAATTCCAGAGAAACATTCATAGAGCGCAAATTGGATAAATGTAT  1171

seq1  AGTCTTATGGTTTATCCAGAACTAGCATCAGAATTC  1235
      ||||||||||||||||||||||||||||||||||||
seq2  AGTCTTATGGTTTATCCAGAACTAGCATCAGAATTC  1207


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