BAC Information

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BAC

Clone NameB6Ng01-328J07
Chromosome15 (Build37)
Map Location 45,465,581 - 45,466,747
singlet/doubletsinglet
Overlap genenone
Upstream geneEbag9, 5730410E15Rik, A930017M01Rik, EG432950, Kcnv1
Downstream geneLOC100039389, EG432951
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-328J07.bB6Ng01-328J07.g
ACCGA115805GA115806
length1,2431,163
definitionB6Ng01-328J07.b B6Ng01-328J07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaattgaggaatcctgaatggctgagaagcacctaaaaatgtt
caacatccttaatcatctgggaaatgcaaatcaaaacaatcctgagattc
cacctcacaccagtcataatggctaagataaaaaactcaagtgacagcag
atgctggtgaagatgtggcaaaagagatacactcctctattgctgatggg
attgcaagctggtacaaccactctggaaatcagtttggcagttcctgaga
atattggacatactattatgggaggatccagcaataccactcctgggcat
atgcccagaagattctccaacttgtaataaggacacatactccactatgt
tcatagctgccttatttataatagccagaagatgaaaagaacccagatgt
ccctcaacagaggaatggatacagaaaatattatacatttatacaatcaa
gtattatgcagctattaaaacaatggattcatgaaattcttagaaaaatg
gatggatctggaggctatcatcctgagtgaggtaacccaatcacaaaaga
acaaacatgatatgcactcattgataagtgtatgttagcccagaagctca
gagcagccaacattcaatttgtaaaacacatgaaactcaagaagaaggaa
gaccaaagtttcaatactttgatccatcttagaagggggaacaaaatacc
catggaagcagttacagagacaaagttcagagcagatactgaagaaatta
tcatctacagactgtcccacctggtgatgcatcacataaacaaccactaa
actcagacactattgtagatgtcaacaaaagccagctgacaggaggctga
taaagctgtctcctgagaggctttgccagggcctgacaaacatagaagtg
gatgttcacagctacccattggacaaagtacagggtctccaatgaaggaa
ttagagaaagtacccaaaggagtagaaggggtttgctgctccataggagg
aacacaatatgaactaaccattaccccataggtttcttggagtaaaccac
caatcaaagaaagcacatcgtgaactcatagctctagctgcataatgtag
cagagatggcttagtgatcatcatggagaaagcccttgggtcttgtgagt
tctatgtcccatagggaagtcagacggattgggtggtggaaacaggacag
gaagggaggtatatgcatatatgctagcgcagtgatcgttaca

gaattcaccgaacaaaacaaattattccctgtcaaccatttaaatagtgg
cctctgagaaatgaaaggctttttaaatataaaaatcacctacaaaatgt
gtacagcactttgcacatcagatagcatgataataaatttcatacttctt
aagctcacttcaaataacattccactgctttgcttattttattaaaataa
aatgatataagggccttttcttttccccattgagaggatttctgtaaatt
tgtttgtccttgaaaaaattggcattgcttggagattacaagacattact
ggataaaggcaaatgcaagaagagctacccataagttacagcaaacaaaa
taagaaatatattttacctatgtatgttatttatgggtaaaataaatttg
gaactcatttataatatcataatgtaaatttctgaaaagttattccagaa
atcgtttggatgactatgtttttataattttacagtaaaataaaacaaca
aaatggtgcaaactaaattgcaaggttctttgtattctaagatcagtgac
ccctttactgctttcagttttgaatggctagtggtgagagcttatgtgct
ttgtctcttacactacatttcatccttttgggggtactaaaatgtttctg
ttctaataaagaacagatattaaccctacttgattcataaacctaactca
ctgaggtaattgattctcctaaatgggtttaaatatatatgcctctgctg
ttctaaacattcactcactgcaaaattgatctgggttgtctgcctgagac
tttgtctgaccttgagttctgtaggactcctgaactgacgaatcaattac
actgctccaaaatcaccttggctccctttcactttttcttcttgttatgc
caaaatacctacagacaggcagagagtatgtcttaaacgccagacagggt
gtcggtcagccatgactcttttgaactaagcattctgaaccctaatgaaa
ggagagctagcttttgaatactagatgttgtcttactatatgccctcctc
ggacccctctctccttgagatacccagtgatgctaatgatagcactgtga
tcatattaaaaaatatggatactaataatactagatgtttataacacaat
aaatgcctagcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_45465581_45466747
seq2: B6Ng01-328J07.g_66_1228

seq1  GAATTCACCGAACAAAACAAATTATTCCCTGTCAACCATTTAAATAGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCGAACAAAACAAATTATTCCCTGTCAACCATTTAAATAGTGG  50

seq1  CCTCTGAGAAATGAAAGGCTTTTTAAATATAAAAATCACCTACAAAATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGAGAAATGAAAGGCTTTTTAAATATAAAAATCACCTACAAAATGT  100

seq1  GTACAGCACTTTGCACATCAGATAGCATGATAATAAATTTCATACTTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGCACTTTGCACATCAGATAGCATGATAATAAATTTCATACTTCTT  150

seq1  AAGCTCACTTCAAATAACATTCCACTGCTTTGCTTATTTTATTAAAATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCACTTCAAATAACATTCCACTGCTTTGCTTATTTTATTAAAATAA  200

seq1  AATGATATAAGGGCCTTTTCTTTTCCCCATTGAGAGGATTTCTGTAAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATATAAGGGCCTTTTCTTTTCCCCATTGAGAGGATTTCTGTAAATT  250

seq1  TGTTTGTCCTTGAAAAAATTGGCATTGCTTGGAGATTACAAGACATTACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTCCTTGAAAAAATTGGCATTGCTTGGAGATTACAAGACATTACT  300

seq1  GGATAAAGGCAAATGCAAGAAGAGCTACCCATAAGTTACAGCAAACAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAAAGGCAAATGCAAGAAGAGCTACCCATAAGTTACAGCAAACAAAA  350

seq1  TAAGAAATATATTTTACCTATGTATGTTATTTATGGGTAAAATAAATTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAATATATTTTACCTATGTATGTTATTTATGGGTAAAATAAATTTG  400

seq1  GAACTCATTTATAATATCATAATGTAAATTTCTGAAAAGTTATTCCAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCATTTATAATATCATAATGTAAATTTCTGAAAAGTTATTCCAGAA  450

seq1  ATCGTTTGGATGACTATGTTTTTATAATTTTACAGTAAAATAAAACAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTTTGGATGACTATGTTTTTATAATTTTACAGTAAAATAAAACAACA  500

seq1  AAATGGTGCAAACTAAATTGCAAGGTTCTTTGTATTCTAAGATCAGTGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGTGCAAACTAAATTGCAAGGTTCTTTGTATTCTAAGATCAGTGAC  550

seq1  CCCTTTACTGCTTTCAGTTTTGAATGGCTAGTGGTGAGAGCTTATGTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTACTGCTTTCAGTTTTGAATGGCTAGTGGTGAGAGCTTATGTGCT  600

seq1  TTGTCTCTTACACTACATTTCATCCTTTTGGGGGTACTAAAATGTTTCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTCTTACACTACATTTCATCCTTTTGGGGGTACTAAAATGTTTCTG  650

seq1  TTCTAATAAAGAACAGATATTAACCCTACTTGATTCATAAACCTAACTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAATAAAGAACAGATATTAACCCTACTTGATTCATAAACCTAACTCA  700

seq1  CTGAGGTAATTGATTCTCCTAAATGGGTTTAAATATATATGCCTCTGCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGTAATTGATTCTCCTAAATGGGTTTAAATATATATGCCTCTGCTG  750

seq1  TTCTAAACATTCACTCACTGCAAAATTGATCTGGGTTGTCTGCCTGAGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAACATTCACTCACTGCAAAATTGATCTGGGTTGTCTGCCTGAGAC  800

seq1  TTTGTCTGACCTTGAGTTCTGTAGGACTCCTGAACTGACGAATCAATTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTGACCTTGAGTTCTGTAGGACTCCTGAACTGACGAATCAATTAC  850

seq1  ACTGCTCCAAAATCACCTTGGCTCCCTTTCACTTTTTCTTCTTGTTTATG  900
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ACTGCTCCAAAATCACCTTGGCTCCCTTTCACTTTTTCTTCTTG-TTATG  899

seq1  CCAAAATACCTACAGACAGGCAGAGAGTATGTCTTAAAACGCCAGACAGG  950
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CCAAAATACCTACAGACAGGCAGAGAGTATGTCTT-AAACGCCAGACAGG  948

seq1  GTGTCGGTCAGCCATGACTCTTTTGAACTAAGCATTCTGAACCCTAATGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCGGTCAGCCATGACTCTTTTGAACTAAGCATTCTGAACCCTAATGA  998

seq1  AAGGAGAGCTAGCTTTTGAATACTAGATGTGTTCTTACTATATGCCCTCC  1050
      ||||||||||||||||||||||||||||||  ||||||||||||||||||
seq2  AAGGAGAGCTAGCTTTTGAATACTAGATGTTGTCTTACTATATGCCCTCC  1048

seq1  TCCGACCCCTCTCCTCCTTGAGATACCCAGTGATGCTAATGATAGCACTT  1100
      || ||||||||| ||||||||||||||||||||||||||||||||||| |
seq2  TCGGACCCCTCT-CTCCTTGAGATACCCAGTGATGCTAATGATAGCAC-T  1096

seq1  GTGATCATAT--AAAAATAT-GATACATAAATAATACATAAGATGTTTAT  1147
      ||||||||||  |||||||| |||||   ||||||||   ||||||||||
seq2  GTGATCATATTAAAAAATATGGATAC--TAATAATAC--TAGATGTTTAT  1142

seq1  AACAC-ATAAATGCTTAGCAT  1167
      ||||| |||||||| ||||||
seq2  AACACAATAAATGCCTAGCAT  1163


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