BAC Information

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BAC

Clone NameB6Ng01-330A02
Chromosome15 (Build37)
Map Location 24,527,907 - 24,529,010
singlet/doubletsinglet
Overlap geneLOC666999
Upstream geneLOC666989
Downstream geneLOC100040492, LOC100040499, LOC100040529, 9230109A22Rik, 4930445E18Rik, Basp1, EG432939, LOC100040583
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330A02.bB6Ng01-330A02.g
ACCGA116806GA116807
length1,0631,100
definitionB6Ng01-330A02.b B6Ng01-330A02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaaatggcagagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatgggtaagatcaaaaactcaggtgacaga
agatgctggtgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactttggaaatcagtctggcagttcctca
gaaaattggacacagtactactggaggatcccgcaatacctttcctgggc
atatatccagaagaggccccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatcaccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactctgctattaaaaagaatgaatttatgaaattcctaaccaa
atggatggacctggagggcatcatcctgagttaggtaacccaatcacaaa
gcaactcacacaacatgtactcactgataagtggatattagtccagaaac
ttaggatacccaagatataagatacaatttgctaaacgcatgaaactcaa
gaagaacaaagaccaaagtatggacactttgccgcttcttagaattggaa
acaaaacacccatggaaggagttacagagacaaaatttggagctgtgatg
aaaggatggaccatcctgtgattgccatatccagggatccatcccataat
cagcttccaaagactgacaccattgcatacactagcaagattttgctgaa
aggacccagatatagctgtctcttgtgagactatgccggggcctagcaaa
cacagaagtggatgctcacagtcagctattggatgcatcacaggccccca
atggaggagctagagaaattacccaaggagctaaagggaactgcacccta
tagtggaacagcaatatgaactaacagtaccccgagctcttgactctagc
tgcatatgtatca

gaattcactatagtcaacttcatgaggtacataaggagaacaaggtaaaa
acaaaacattatcaggaatctcactcatactttacagctgggtgcttgaa
caatgtacacacaagaaccttacatcacagtgtgtttaagttggtcaaaa
ctatcgaaatttggtatgactttgcatttaatcatgagaatgtttgaata
aaaatacatatgtaggtatcgtaaatatttagaggctaaaagaaataaat
aatacatgactacatacagagacacagttgtcaatgcaggttcttttcta
cagtgttgtcaaaagaaaataatgacacatttttattgtccaatattgta
agttttgattaaaaggcaaattaagattatagtagaggttaagctactaa
ctcttacagttttctaattcctggcaggcattctcaaataaagtttaaga
acttgtgaagtatgtcttatccaatttaaaaaataaaattggaactttaa
atctcaatacctatagaatgcattgattgctgagccacaatacagaaaat
gaatactctttttttgtaaaccatgttttaaattacgagtccatgtggct
gagaatgtttatggatgttattgtagtgtccacagaggtcagaagagggc
atcatttctcctggagctggagttagaggaagctgtcagctgccctgtgg
gtggtgggtaccaaactctgccctcttacagaacttgcaagctcagtttc
tattttcttcctctaaaccaaatattatttgacattatggagcatgctgg
caaacgtaccatagcattttatctcagatataaccacgttgacactcaca
aatattacacacattcattttttaataaatctgttgcaagttttatagtg
ctttattgtgctcatggtttttgcatttttagatacataaaacaccatct
tttgaaataaattggcgaaagttctgtcagtattcatatccccagagata
tcattcaatgtaaagatggatgattcattttaagggcaaattattagcat
ctccagtaatacagagaatgccaaaaaattagacaggattacttaattca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_24527907_24529010
seq2: B6Ng01-330A02.g_69_1168

seq1  GAATTCACTATAGTCAACTTCATGAGGTACATAAGGAGAACAAGGTAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATAGTCAACTTCATGAGGTACATAAGGAGAACAAGGTAAAA  50

seq1  ACAAAACATTATCAGGAATCTCACTCATACTTTACAGCTGGGTGCTTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACATTATCAGGAATCTCACTCATACTTTACAGCTGGGTGCTTGAA  100

seq1  CAATGTACACACAAGAACCTTACATCACAGTGTGTTTAAGTTGGTCAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTACACACAAGAACCTTACATCACAGTGTGTTTAAGTTGGTCAAAA  150

seq1  CTATCGAAATTTGGTATGACTTTGCATTTAATCATGAGAATGTTTGAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCGAAATTTGGTATGACTTTGCATTTAATCATGAGAATGTTTGAATA  200

seq1  AAAATACATATGTAGGTATCGTAAATATTTAGAGGCTAAAAGAAATAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACATATGTAGGTATCGTAAATATTTAGAGGCTAAAAGAAATAAAT  250

seq1  AATACATGACTACATACAGAGACACAGTTGTCAATGCAGGTTCTTTTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATGACTACATACAGAGACACAGTTGTCAATGCAGGTTCTTTTCTA  300

seq1  CAGTGTTGTCAAAAGAAAATAATGACACATTTTTATTGTCCAATATTGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTTGTCAAAAGAAAATAATGACACATTTTTATTGTCCAATATTGTA  350

seq1  AGTTTTGATTAAAAGGCAAATTAAGATTATAGTAGAGGTTAAGCTACTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTGATTAAAAGGCAAATTAAGATTATAGTAGAGGTTAAGCTACTAA  400

seq1  CTCTTACAGTTTTCTAATTCCTGGCAGGCATTCTCAAATAAAGTTTAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTACAGTTTTCTAATTCCTGGCAGGCATTCTCAAATAAAGTTTAAGA  450

seq1  ACTTGTGAAGTATGTCTTATCCAATTTAAAAAATAAAATTGGAACTTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTGAAGTATGTCTTATCCAATTTAAAAAATAAAATTGGAACTTTAA  500

seq1  ATCTCAATACCTATAGAATGCATTGATTGCTGAGCCACAATACAGAAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAATACCTATAGAATGCATTGATTGCTGAGCCACAATACAGAAAAT  550

seq1  GAATACTCTTTTTTTGTAAACCATGTTTTAAATTACGAGTCCATGTGGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACTCTTTTTTTGTAAACCATGTTTTAAATTACGAGTCCATGTGGCT  600

seq1  GAGAATGTTTATGGATGTTATTGTAGTGTCCACAGAGGTCAGAAGAGGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATGTTTATGGATGTTATTGTAGTGTCCACAGAGGTCAGAAGAGGGC  650

seq1  ATCATTTCTCCTGGAGCTGGAGTTAGAGGAAGCTGTCAGCTGCCCTGTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTCTCCTGGAGCTGGAGTTAGAGGAAGCTGTCAGCTGCCCTGTGG  700

seq1  GTGGTGGGTACCAAACTCTGCCCTCTTACAGAACTTGCAAGCTCAGTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGGGTACCAAACTCTGCCCTCTTACAGAACTTGCAAGCTCAGTTTC  750

seq1  TATTTTCTTCCTCTAAACCAAATATTATTTGACATTATGGAGCATGCTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCTTCCTCTAAACCAAATATTATTTGACATTATGGAGCATGCTGG  800

seq1  CAAACGTACCATAGCATTTTATCTCAGATATAACCACGTTGACACTCACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACGTACCATAGCATTTTATCTCAGATATAACCACGTTGACACTCACA  850

seq1  AATATTACACACATTCA-TTTTTAATAAATCTGTTGCAAGTTTTATAGTG  899
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AATATTACACACATTCATTTTTTAATAAATCTGTTGCAAGTTTTATAGTG  900

seq1  CTTTATTTGTGCTCATGGTTTTTGCATTTTTAGATAACATAAAACACCAT  949
      ||||| ||||||||||||||||||||||||||||| ||||||||||||||
seq2  CTTTA-TTGTGCTCATGGTTTTTGCATTTTTAGAT-ACATAAAACACCAT  948

seq1  CTTTTGAAATAAATTGGCGAAAAGTTCTGTCAGTATTCATATCCCCAGAG  999
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTTTTGAAATAAATTGGCG-AAAGTTCTGTCAGTATTCATATCCCCAGAG  997

seq1  ATATCATTCAATGTAAGGATGGATGATTCATTTTTAAAGGCAAATAAATA  1049
      |||||||||||||||| ||||||||||||| |||||| ||||||| | ||
seq2  ATATCATTCAATGTAAAGATGGATGATTCA-TTTTAAGGGCAAATTATTA  1046

seq1  GCAATCTCCAGTAATTACAGAAGATGCCAAAAAATTAGGACA-GATTAC-  1097
      || ||||||||||| ||||||  |||||||||||||| |||| |||||| 
seq2  GC-ATCTCCAGTAA-TACAGAGAATGCCAAAAAATTA-GACAGGATTACT  1093

seq1  TAATTCA  1104
      |||||||
seq2  TAATTCA  1100


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