BAC Information

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BAC

Clone NameB6Ng01-332F09
Chromosome15 (Build37)
Map Location 24,470,519 - 24,471,637
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666989
Downstream geneLOC666999, LOC100040492, LOC100040499, LOC100040529, 9230109A22Rik, 4930445E18Rik, Basp1, EG432939, LOC100040583
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-332F09.bB6Ng01-332F09.g
ACCGA118467GA118468
length5851,111
definitionB6Ng01-332F09.b B6Ng01-332F09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
aaatgtatgtcatgcttgctaaccaatagatttaaaggtcaatatgctta
gccagtaaatttgaactctaaccttgctgatgtaatctgtgcccctaaaa
agtataaaaactgcttgtaatagacattcaggattgccttcttggtaact
ctcctagagggactaattgaaggtggactcagatttgctggaaaataaac
cttgcttttgcatagatctgcatctctcactcaggggcatctcaaagtaa
gtaccactgactgaaggttggggacttacagtttcatatatatatatata
tatatatatatatatatatatatatatatatatatatatatatatatata
tatatatatatctctctctctctctctatatatatatatatttccctcta
tcttgtgtgtgtttccctatctaactttatgccttaccttataaacctat
gtttgtttatatctgcccatatgtgcacaatgtcaagtctatatatataa
caaatatgtcagtattatttttccaggttccactccttatcaaggagttc
ttggtaaataaaattgctatataaaaaagacagat

gaattctcaatctgtacctcctctgtgtttttgctactgttattattgtc
aataaattgaactcaactgaacgtacacacatggggctttctctttaacc
aggactttcttttagtaattttgcattttcggtatacaaactgtgcttat
gttcttttaggattatgtttacataactggccttttttgcctttattgtt
tttttttttctgcattatatttttgtttcatgcaattcaggcatgttata
aatctgtaaagatcaatactgattgcaaatcaatgtctgattttttttag
tatacaggaatggaactcttttatatttggtcttactatctagtgttcat
ctaatcaagactgttgccattaactggaggaaacagctctgcgattctgt
agatgtggctggctattgtcatgtgaatgagaacataggttcaacaagaa
cagtttcatagatcaaaatatgtaagtcaattttgtgtgtgagattttct
aatttgtaaagttggaaaaaaatttacaaagctacaatgactttacactc
atgtcaaaactgaagaaaatgtaggtttgtttataactgaccctgtgaaa
tttataactttattagaaaaaattggaattttcttctcaataattatctt
atgtatggacgatgtttaattcctttgtttttctaatttcattcttttta
ttcatatgcttatctgatactaccaaacacttccattcccttgaattgtt
ttttttgtttgtttctttgggttttttttgttttttgttttttgtttttt
gtttttttttttttttgtttctttttgtttttttgagtgagagcacagaa
aatgaaaacacttacttggtttctcatctagagggcaaatactttggtgt
tcccaagcaaaacatcagttgttattatggctgcatagttgagcacaagt
cctgcaggacgttatagtaagtctcatcccccccaaagataattaattac
aattaaccacaaaaaaataaagtggtcaacaacaataaataaattgaagt
aggaagatataaactttggtattcatcccttccctggttaagaaactcaa
atcctaggact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_24470519_24471637
seq2: B6Ng01-332F09.g_68_1178 (reverse)

seq1  AGTCCTAGAATTTGAGTTTCTTTGACCAAGGAAGGGATGAATACAAAAGT  50
      |||||||| ||||||||||| || |||| ||||||||||||||| |||||
seq2  AGTCCTAGGATTTGAGTTTC-TTAACCAGGGAAGGGATGAATACCAAAGT  49

seq1  TCTATATCTCCCTTACTTCATTTTATTTATTTGTTTGTTTGACCACTTTA  100
      | ||||||| || ||||||| |||||||| |||||   ||||||||||||
seq2  T-TATATCTTCC-TACTTCAATTTATTTA-TTGTT--GTTGACCACTTTA  94

seq1  TTTTTTTTGTTGTTTATTTGTTTATTTAATTATTCTTTGGGGGGGATGAG  150
       ||||||||| ||| ||   | || ||||||| |||||||||||||||||
seq2  -TTTTTTTGTGGTTAAT---TGTAATTAATTA-TCTTTGGGGGGGATGAG  139

seq1  ACTTTACTATAACGTCCTGCAGGCTTTGTGCTC-ACTATGCAGCCATAAT  199
      || ||||||||||||||||||||  |||||||| ||||||||||||||||
seq2  AC-TTACTATAACGTCCTGCAGGACTTGTGCTCAACTATGCAGCCATAAT  188

seq1  AACAACTGATGTTTTGCTT-GGAACACCAAAGTATTTGCCCTCTAGATGA  248
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AACAACTGATGTTTTGCTTGGGAACACCAAAGTATTTGCCCTCTAGATGA  238

seq1  GAAACCAAGTAAGTG-TTTCATTTTCTGTGCTCTCACTCAAAAAAACAAA  297
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GAAACCAAGTAAGTGTTTTCATTTTCTGTGCTCTCACTCAAAAAAACAAA  288

seq1  AAAAAAC-AAAAAAAAAAAAAACAAAAAACAAAAAACAAAAAACAAAAAA  346
      || |||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACAAAAAAAAAAAAAAACAAAAAACAAAAAACAAAAAACAAAAAA  338

seq1  AACCCAAAGAAACAAACAAAAAAAACAATTCAAGGGAATGGAAGTGTTTG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAAAGAAACAAACAAAAAAAACAATTCAAGGGAATGGAAGTGTTTG  388

seq1  GTAGTATCAGATAAGCATATGAATAAAAAGAATGAAATTAGAAAAACAAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTATCAGATAAGCATATGAATAAAAAGAATGAAATTAGAAAAACAAA  438

seq1  GGAATTAAACATCGTCCATACATAAGATAATTATTGAGAAGAAAATTCCA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTAAACATCGTCCATACATAAGATAATTATTGAGAAGAAAATTCCA  488

seq1  ATTTTTTCTAATAAAGTTATAAATTTCACAGGGTCAGTTATAAACAAACC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTCTAATAAAGTTATAAATTTCACAGGGTCAGTTATAAACAAACC  538

seq1  TACATTTTCTTCAGTTTTGACATGAGTGTAAAGTCATTGTAGCTTTGTAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTTCTTCAGTTTTGACATGAGTGTAAAGTCATTGTAGCTTTGTAA  588

seq1  ATTTTTTTCCAACTTTACAAATTAGAAAATCTCACACACAAAATTGACTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTCCAACTTTACAAATTAGAAAATCTCACACACAAAATTGACTT  638

seq1  ACATATTTTGATCTATGAAACTGTTCTTGTTGAACCTATGTTCTCATTCA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTTTGATCTATGAAACTGTTCTTGTTGAACCTATGTTCTCATTCA  688

seq1  CATGACAATAGCCAGCCACATCTACAGAATCGCAGAGCTGTTTCCTCCAG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACAATAGCCAGCCACATCTACAGAATCGCAGAGCTGTTTCCTCCAG  738

seq1  TTAATGGCAACAGTCTTGATTAGATGAACACTAGATAGTAAGACCAAATA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGGCAACAGTCTTGATTAGATGAACACTAGATAGTAAGACCAAATA  788

seq1  TAAAAGAGTTCCATTCCTGTATACTAAAAAAAATCAGACATTGATTTGCA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGAGTTCCATTCCTGTATACTAAAAAAAATCAGACATTGATTTGCA  838

seq1  ATCAGTATTGATCTTTACAGATTTATAACATGCCTGAATTGCATGAAACA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTATTGATCTTTACAGATTTATAACATGCCTGAATTGCATGAAACA  888

seq1  AAAATATAATGCAGAAAAAAAAAAACAATAAAGGCAAAAAAGGCCAGTTA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATAATGCAGAAAAAAAAAAACAATAAAGGCAAAAAAGGCCAGTTA  938

seq1  TGTAAACATAATCCTAAAAGAACATAAGCACAGTTTGTATACCGAAAATG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAACATAATCCTAAAAGAACATAAGCACAGTTTGTATACCGAAAATG  988

seq1  CAAAATTACTAAAAGAAAGTCCTGGTTAAAGAGAAAGCCCCATGTGTGTA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTACTAAAAGAAAGTCCTGGTTAAAGAGAAAGCCCCATGTGTGTA  1038

seq1  CGTTCAGTTGAGTTCAATTTATTGACAATAATAACAGTAGCAAAAACACA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCAGTTGAGTTCAATTTATTGACAATAATAACAGTAGCAAAAACACA  1088

seq1  GAGGAGGTACAGATTGAGAATTC  1119
      |||||||||||||||||||||||
seq2  GAGGAGGTACAGATTGAGAATTC  1111


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