BAC Information

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BAC

Clone NameB6Ng01-333N22
Chromosome15 (Build37)
Map Location 43,543,066 - 43,543,822
singlet/doubletsinglet
Overlap genenone
Upstream geneRspo2, LOC675960, Eif3s6, Ttc35
Downstream geneLOC100039288, Tmem74, LOC100039309, Trhr, LOC665041, Nudcd1, Eny2, Pkhd1l1, Ebag9, 5730410E15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-333N22.bB6Ng01-333N22.g
ACCGA119523GA119524
length1,1421,204
definitionB6Ng01-333N22.b B6Ng01-333N22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaacataaaaccataaccactgaacctgatagtaggaaatagcct
tgaactcattggtacatgaaaagtctttttgaatagagcactgttagcac
tggccctaaaatcaacaattaacaaataggacctcaggaaactgagagac
ttctgaatggcagaatggacatttgcaatatcatttggaaaatgtggcag
tctacattggtgataattcacctatatgggatggaaggcgtgttccttca
tgtcttttggattcctggatcctgtcaaagttacgacctccacagccccc
acaggagaagagtgtggctagtggtcatgtacacaatgtcccaagtttct
gaccttcaggctagactccccccagttacctagcaacagaagataacagc
ccactataagaggggctacttggccccaccttactctctccctcttactc
tctagcctttcttgtccctctcgttttcccccttctctcctcttggccat
ggccaatctctcaatctttctactttctctctttccccctgcctttctac
aataaagctctaaaactatagactgtctctgttcatcaaggcccactgca
cttggacgatgggataggctttctcctaatgagccctacctaatgtccca
tcagaaggcttcctgagcttgagccagggaccagacttaggactttcacc
tgtgtgggaacctctctccctctgcactctctcctgtaactccggggcca
agagtgtcagcccggactcctggtatcaggggctgccccttgtccacccc
ctgtcaagtggggtccagtggcttcacacatccagatgcccacccgggtc
cgagtagaaagcgttcagcagtcctcccgcatcccacgcccaacacaaat
ctaaacagggttctcagtgtaacaaacgccaatgcctgaatggctaagat
taataacacacacaaagctcatgctagtgatattttgcagtaggggaaca
ctcctccattgcttgtggaactataaactcatacagcactatgaaatcag
tggtgggtggttcttcagagatgggagtgatctatagcgggtttactaat
ttgggatatataccagggaatacttcatcctacatatagact

gaattcagaagaggatattaaattcatttatataaagagaaagaggaatg
tagaatatttagctataaagacaagaatctccacagagaggagaaagaaa
tgagaattggcataattgttttcaagactacaaagataataaataaataa
ataaataaataaatccagcgctttgatctccacacttgggagatcaggga
aagaacagatagcatccttgtgagttcaaggccaccctaatctacataaa
atccaagtcagcccaggctatatagataaaccctgtctcaataaataata
actattttaaattatcaaaatgaagattgttataagctcagtggtgaaaa
tggtatggtacaccctcttaagagaagtcaaaatagaacaaacctaaata
ggaaagggcctgctaaattgaatcagtctataattttgatgactttgaac
tgctggaccaagtatatcctatgttgggagaaaggctctaagtttgtgtt
aacaggaaagaaaaaaagactttggactccttccaaattagtaaggatca
gatttgatacagggagtgtagtctcccctcccccagcctgaaacctgctt
gctcaggggtggagcttcctgctcattcgttctgccacacccactgctgg
aacctgccgctttgctgttctgaagccatcacatgctcaccctactactg
gacccgagattattaggcgggaatcgggttccctcccccttcctttataa
ctgaaatgtcagaactagtaaaattgagctttgatcagaaatgaatttgt
cttagctccgtttcttttttcgccccgtttagattcctctcttactgctc
gagtagccatatcagtcgaaccgttcacgttgagagctgctggcggccgc
aacattttggcgcctgaacagggacttgaacaatggcagaggcatgctaa
gagaaacgctgctgctgtgagctccacaggaaagatcttcgtatcagaca
ttggagccacagacagtacacatgctagcgctagcttaaaatttcagttt
gttaaagtgtgctgagatgtggtaagaacgaataagtgatcagtgctaac
ccacgctggtctgctggtcaggcagcggtttaagtcgactgaaacgacag
gacggttggttcggacctgtcttgtaacggcacctatgtctgtaaggatg
tgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_43543066_43543822
seq2: B6Ng01-333N22.b_446_1189

seq1  GCCCACTATAAGAGGGGCTACTTGGCCCCACCTTACTCTCTCCCTCTTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCACTATAAGAGGGGCTACTTGGCCCCACCTTACTCTCTCCCTCTTAC  50

seq1  TCTCTAGCCTTTCTTGTCCCTCTCGTTTTCCCCCTTCTCTCCTCTTGGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAGCCTTTCTTGTCCCTCTCGTTTTCCCCCTTCTCTCCTCTTGGCC  100

seq1  ATGGCCAATCTCTCAATCTTTCTACTTTCTCTCTTTCCCCCTGCCTTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCAATCTCTCAATCTTTCTACTTTCTCTCTTTCCCCCTGCCTTTCT  150

seq1  ACAATAAAGCTCTAAAACTATAGACTGTCTCTGTTCATCAAGGCCCACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAAAGCTCTAAAACTATAGACTGTCTCTGTTCATCAAGGCCCACTG  200

seq1  CACTTGGACGATGGGATAGGCTTTCTCCTAATGAGCCCTACCTAATGTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGGACGATGGGATAGGCTTTCTCCTAATGAGCCCTACCTAATGTCC  250

seq1  CATCAGAAGGCTTCCTGAGCTTGAGCCAGGGACCAGACTTAGGACTTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGAAGGCTTCCTGAGCTTGAGCCAGGGACCAGACTTAGGACTTTCA  300

seq1  CCTGTGTGGGAACCTCTCTCCCTCTGCACTCTCTCCTGTAACTCCGGGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTGGGAACCTCTCTCCCTCTGCACTCTCTCCTGTAACTCCGGGGC  350

seq1  CAAGAGTGTCAGCCCGGACTCCTGGTATCAGGGGCTGCCCCTTGTCCACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGTGTCAGCCCGGACTCCTGGTATCAGGGGCTGCCCCTTGTCCACC  400

seq1  CCCTGTCAAGTGGGGTCCAGTGGCTTCACACATCCAGATGCCCACCCGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTCAAGTGGGGTCCAGTGGCTTCACACATCCAGATGCCCACCCGGG  450

seq1  TCCGAGTAGAAAGCGTTCAGCAGTCCTCCCGCATCCCACGCCCAACACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGAGTAGAAAGCGTTCAGCAGTCCTCCCGCATCCCACGCCCAACACAA  500

seq1  ATCTAAACAGGGTTCTCAGTGTAACAAACGCCAATGCCTGAATGGCTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAACAGGGTTCTCAGTGTAACAAACGCCAATGCCTGAATGGCTAAG  550

seq1  ATTAATAACACACACAAAAGCTCATGCTAGTGATATTTTGCAGTAAGGGG  600
      ||||||||||||||| |||||||||||||||||||||||||||| |||||
seq2  ATTAATAACACACAC-AAAGCTCATGCTAGTGATATTTTGCAGT-AGGGG  598

seq1  AACACTCCTCCATTGCTTGTGGAACTATAAACTCATACAGCCACTATGAA  650
      |||||||||||||||||||||||||||||||||||||||| ||||||| |
seq2  AACACTCCTCCATTGCTTGTGGAACTATAAACTCATACAG-CACTATG-A  646

seq1  AATCAGTG--TGGTGGTTCTTCAGGAAGATGGGAGTTGATCTATTTTTTT  698
      ||||||||   |||||||||||||  ||||||||| |||||||       
seq2  AATCAGTGGTGGGTGGTTCTTCAG--AGATGGGAG-TGATCTA-------  686

seq1  TTTTTTTTTTTACTAATTTTGGATATATACCCAAAGGATACTTCATCCTA  748
       |      ||||||||||| ||||||||| |||  | |||||||||||||
seq2  -TAGCGGGTTTACTAATTTGGGATATATA-CCAGGGAATACTTCATCCTA  734

seq1  C-CATAGACT  757
      |  |||||||
seq2  CATATAGACT  744


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