BAC Information

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BAC

Clone NameB6Ng01-334J24
Chromosome15 (Build37)
Map Location 40,504,331 - 40,505,553
singlet/doubletsinglet
Overlap geneZfpm2
Upstream geneRims2, Tm7sf4, Dpys, Lrp12, LOC100039130, LOC670013, LOC664872
Downstream genePpia-ps25
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-334J24.bB6Ng01-334J24.g
ACCGA120085GA120086
length1,19857
definitionB6Ng01-334J24.b B6Ng01-334J24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaatacaaagttgtagactttgaaaactgatagcctacctctca
tagggcacagctgtataagtcactcttcctcaaaaaaggaacatacataa
aaggactttgtaaagtacaccctggcaaatactgtctgatagaaaactat
catgtttggggccttcaaagttaatatataagttgaactaaaccctcgtt
tttcagtaaaccattttcaaatctctttagaataatcagagatcaggact
cacagaactccatgggtttttaaggagaaggaacatatctttggattatt
gccacccaattctgaaggtgaattctagtaacaataataaccatgaggcc
cactcaccccagatatttagtaaaataatctgggctttgtcattttaacc
agatcatcttcaataatataacctgtaaggcctatcagtaagtctgtatg
agtctatttttagtactaaccactaactttatcatcaagaaaaccacttg
aagcttttaacagttgatggctggtacaccagcaagacacacaggagcca
aaattcttgacagcaagacatatctcaagcaatcaatgcatttctttcca
aattgtaccctctgggcataaagtcctcacaaaatgttacaagtatttgt
tcatatatatatgttcaacttgtggccatcggtccaggtgcttcccataa
tagccacaaatgtaaccaacacaaatataaactgcttgaaaacattctga
gtttttttttttttttgcatgtcatttattagtaaatagactggatagtt
tcccaagcacgaaattgggagacaaaaatgtcacatcacagcaacaaaag
gttggacatgccttctagaacaagcatcttgacagattctcagatggcta
catataaaactataataaaatcttcaatactatatagagtgttcagagta
tatgtgaatgaactgagagaaaaaaaactgaccgttttggatattttgtg
tcaataaataaataataaataaataaaagtcctaatgctataagtcctta
catataatagacctcacaagatgcgtcagcttttcagattctaggttctt
tcatggagaaaaccaatatttgtattttctccagtctacatgttactcat
ctactggtcactccttaatattaagtcacaaattaattctctttacct

catgcccaactcaaggaaggaaagaaggaagtgagggaaggagggaggga
gggaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_40504331_40505553
seq2: B6Ng01-334J24.b_45_1242 (reverse)

seq1  AGGTAAAGAGAATTAAATATGGTGACTTAAATAATTTTAAGAGATGACAC  50
      ||||||||||||||||   | ||||||    |||| |||||   ||||  
seq2  AGGTAAAGAGAATTAA--TTTGTGACT----TAATATTAAGGAGTGAC--  42

seq1  AAAGTTAGGATGGAAGTAACAATGTAGAATTGGGAGAAAATTACAAAATA  100
        |||   ||||  |||||| ||||||| |  |||||||| ||| |||||
seq2  -CAGT--AGATG--AGTAAC-ATGTAGACT--GGAGAAAA-TAC-AAATA  82

seq1  TTTGGTTCTCTCCATTGAAAGAACCTAGAATCTGGAAAAGCTGACGCATC  150
       |||||| |||||| |||||||||||||||||| ||||||||||||||||
seq2  -TTGGTTTTCTCCA-TGAAAGAACCTAGAATCT-GAAAAGCTGACGCATC  129

seq1  TTGTTGAGTCTATTATATGTTAAGGACTTATAGCATTTAGGACTTTTATT  200
      ||||   |||||||||||| ||||||||||||||| ||||||||||||||
seq2  TTGTGAGGTCTATTATATG-TAAGGACTTATAGCA-TTAGGACTTTTATT  177

seq1  TATTTATTTATTTATTTATTTGACAC-AAATATCCAAAACGGTCAGTTTT  249
      |||||| ||||||||||| ||||||| ||||||||||||||||||| |||
seq2  TATTTA-TTATTTATTTA-TTGACACAAAATATCCAAAACGGTCAG-TTT  224

seq1  TTTTTCTCTCAGTTCATTCACATATACTCTGAACACTCTATATAGTATTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTCTCAGTTCATTCACATATACTCTGAACACTCTATATAGTATTG  274

seq1  AAGATTTTATTATAGTTTTATATGTAGCCATCTGAGAATCTGTCAAGATG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTTATTATAGTTTTATATGTAGCCATCTGAGAATCTGTCAAGATG  324

seq1  CTTGTTCTAGAAGGCATGTCCAACCTTTTGTTGCTGTGATGTGACATTTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTCTAGAAGGCATGTCCAACCTTTTGTTGCTGTGATGTGACATTTT  374

seq1  TGTCTCCCAATTTCGTGCTTGGGAAACTATCCAGTCTATTTACTAATAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCCCAATTTCGTGCTTGGGAAACTATCCAGTCTATTTACTAATAAA  424

seq1  TGACATGCAAAAAAAAAAAAAAACTCAGAATGTTTTCAAGCAGTTTATAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATGCAAAAAAAAAAAAAAACTCAGAATGTTTTCAAGCAGTTTATAT  474

seq1  TTGTGTTGGTTACATTTGTGGCTATTATGGGAAGCACCTGGACCGATGGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTGGTTACATTTGTGGCTATTATGGGAAGCACCTGGACCGATGGC  524

seq1  CACAAGTTGAACATATATATATGAACAAATACTTGTAACATTTTGTGAGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGTTGAACATATATATATGAACAAATACTTGTAACATTTTGTGAGG  574

seq1  ACTTTATGCCCAGAGGGTACAATTTGGAAAGAAATGCATTGATTGCTTGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATGCCCAGAGGGTACAATTTGGAAAGAAATGCATTGATTGCTTGA  624

seq1  GATATGTCTTGCTGTCAAGAATTTTGGCTCCTGTGTGTCTTGCTGGTGTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGTCTTGCTGTCAAGAATTTTGGCTCCTGTGTGTCTTGCTGGTGTA  674

seq1  CCAGCCATCAACTGTTAAAAGCTTCAAGTGGTTTTCTTGATGATAAAGTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCATCAACTGTTAAAAGCTTCAAGTGGTTTTCTTGATGATAAAGTT  724

seq1  AGTGGTTAGTACTAAAAATAGACTCATACAGACTTACTGATAGGCCTTAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTTAGTACTAAAAATAGACTCATACAGACTTACTGATAGGCCTTAC  774

seq1  AGGTTATATTATTGAAGATGATCTGGTTAAAATGACAAAGCCCAGATTAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTATATTATTGAAGATGATCTGGTTAAAATGACAAAGCCCAGATTAT  824

seq1  TTTACTAAATATCTGGGGTGAGTGGGCCTCATGGTTATTATTGTTACTAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTAAATATCTGGGGTGAGTGGGCCTCATGGTTATTATTGTTACTAG  874

seq1  AATTCACCTTCAGAATTGGGTGGCAATAATCCAAAGATATGTTCCTTCTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCACCTTCAGAATTGGGTGGCAATAATCCAAAGATATGTTCCTTCTC  924

seq1  CTTAAAAACCCATGGAGTTCTGTGAGTCCTGATCTCTGATTATTCTAAAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAAACCCATGGAGTTCTGTGAGTCCTGATCTCTGATTATTCTAAAG  974

seq1  AGATTTGAAAATGGTTTACTGAAAAACGAGGGTTTAGTTCAACTTATATA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTGAAAATGGTTTACTGAAAAACGAGGGTTTAGTTCAACTTATATA  1024

seq1  TTAACTTTGAAGGCCCCAAACATGATAGTTTTCTATCAGACAGTATTTGC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTTTGAAGGCCCCAAACATGATAGTTTTCTATCAGACAGTATTTGC  1074

seq1  CAGGGTGTACTTTACAAAGTCCTTTTATGTATGTTCCTTTTTTGAGGAAG  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTGTACTTTACAAAGTCCTTTTATGTATGTTCCTTTTTTGAGGAAG  1124

seq1  AGTGACTTATACAGCTGTGCCCTATGAGAGGTAGGCTATCAGTTTTCAAA  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACTTATACAGCTGTGCCCTATGAGAGGTAGGCTATCAGTTTTCAAA  1174

seq1  GTCTACAACTTTGTATTGGAATTC  1223
      ||||||||||||||||||||||||
seq2  GTCTACAACTTTGTATTGGAATTC  1198


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