BAC Information

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BAC

Clone NameB6Ng01-335B22
Chromosome15 (Build37)
Map Location 44,529,494 - 44,530,646
singlet/doubletsinglet
Overlap gene5730410E15Rik
Upstream geneLOC100039288, Tmem74, LOC100039309, Trhr, LOC665041, Nudcd1, Eny2, Pkhd1l1, Ebag9
Downstream geneA930017M01Rik, EG432950, Kcnv1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-335B22.bB6Ng01-335B22.g
ACCGA120447GA120448
length1,1431,165
definitionB6Ng01-335B22.b B6Ng01-335B22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgctcagtagagttggcacggacatggggacactcgtcatctc
tcagaactttaggtccctcatcctttctctttctaggaatagaaggatgt
aaggcaacagcagagatgggattcttgagcaagaaggctctgaggacata
caggattgttatccaacattggcatgtgttgttacttatcccttccaggc
ctgtggagctgtagtctgctgtcagtactgtgccttccacatttctgttc
atgtcatcaattaagtacctgaaatgggataaggacaaggatagagcagg
gtgacatgctgtcagagatttccctggaggttgatgggcagttcattagt
caggcctctctgggtactgaagcatgctatcacccagtgcacatggtagc
tttgtttgtcagagtatcttaaatgtttgtatcaaatgtctactaaattc
cagacatgtgctttatatcacaatcttaaccctgtcaaaaaagaggagtg
tttttcatatgtggctctcagggaatggagaactactgctggctcctttt
tgcattcatgtgggactttttctataattctacaattggtgatcaatacc
aatgtcaagaggggttaatttttttttcacaatttgtcccttcatctgaa
acttgcatacttcccccctccccatttccaacctgccaccactggtagta
ttgctgaatggtccattccttgagtctactgcattccaggtaacacactt
gcctctggggaagcagtaaagaataagacacaggccctcccagccacagg
ctagtactcttaactgaattttaagagagttgggtaagatggatggaggt
aaaatgaagggagtattgatttattataaataacatcaatctatcaactc
aacccaagggaacatgggaaaaagaagtagcttggtcacaactccttcca
ggagacatcactaatctacagtgaggaatttttagtgctgtgaaaatgtc
aggtaactgcacttcctgtaacctattttcttgcagtgatgtgagtagct
ccacggacagtgtgtttaaagcatgttctacagtaaacagcaatgtgtgg
aaagcttgtgtaggcttaagaacataacggaggcatccactct

gaattctgttcctactattcttaggtttggtcttttcatagtgtccctga
tttcttagatgttttgtgtcaggaaatttttagatttactattttctgtg
actaatacatttattctatttctttcttttttaaaattttttttcttttt
gattggatattttctttatttacatttcaaatgttatcccctttccaggt
ctctccttcagaaacccccattccatcccctaccccctacttctatgagg
gtgctcccccacccacctactcctgttctcttgccctggcattcccctac
actggggcatccaacacccacaggccccagggcatctcctcccactgata
tccaacaaggccatcctctgccacatatgtggctagcattttcaatgcct
gagaatctctcttccatctcttgtattctgctgacatttgcatctttaat
tcttgttggcttacctagattttccatcttcatgattccttcaatttgta
ttttctttattgcttctatatccatttttaggtcttgaacattttattca
tttccttcacctgtttaggaatctttctctaaggatttattcattttctc
ccattgtttgtttgtgttttcttagctttctttgatggattcatgtttgt
gttttcctggatttctttgaaagatttatttattttcttttaagaacctc
taccatcttcataaagttggttttatgtttttttctgtggaatgtggggc
aatgggctatgtacagatggcctagtctccagttgagctgaggctgtgaa
cccctgtgaaacccagtggtggtgataattcatctacatgggaggaaggt
attccctcatgtctcctggaaccctggctcctgtcaaagttaccaccccc
acactctccacaggagaagcatggctattagtcacatagacaatgtccca
agcttctgtccttcagctaactctccagttacctagcaacacagatatag
ccaatatagaggtgctgctggcctcatctcgctctctctcatcctctctc
ttctatcttttactctctagccttttctctttcctctcttgcccgtttcc
ctcctctggcatgctgatctctctctcgttcacttctctccatttcctcc
cgtgcccctgctgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_44529494_44530646
seq2: B6Ng01-335B22.b_37_1179 (reverse)

seq1  AGAGTGGATGGCCCTCCTTTATGGTCTT-AGCCT-CACAAGCTTTCAACA  48
      ||||||||||  ||||| ||||| |||| ||||| ||||||||||| |||
seq2  AGAGTGGATG--CCTCCGTTATGTTCTTAAGCCTACACAAGCTTTCCACA  48

seq1  CATGGCTTGTTTACTGTAG-ACATGCTTTAAACACACTTGTCCGT-GAGC  96
      ||| || |||||||||||| ||||||||||||||||| ||||||| ||||
seq2  CATTGC-TGTTTACTGTAGAACATGCTTTAAACACAC-TGTCCGTGGAGC  96

seq1  TTACTCACCATCACTTGCAAGAAAATAAGGTTACAGGAAGTGCAGTTACC  146
       |||||| |||||| ||||||||||| ||||||||||||||||||||| |
seq2  -TACTCA-CATCAC-TGCAAGAAAAT-AGGTTACAGGAAGTGCAGTTA-C  141

seq1  CTGACAATTTTCACAGCACTAAAAATTCCTTCACTGTTAGAATTTAGTGA  196
      ||||| ||||||||||||||||||||||| |||||| ||||  |||||||
seq2  CTGAC-ATTTTCACAGCACTAAAAATTCC-TCACTG-TAGA--TTAGTGA  186

seq1  TGTCTCCTGGAAGGAGTTGTGACCAAGCTACTTCTTTTTCCCATGTTCCC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCCTGGAAGGAGTTGTGACCAAGCTACTTCTTTTTCCCATGTTCCC  236

seq1  TTGGGTTGAGTTGATAGATTGATGTTATTTATAATAAATCAATACTCCCT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTTGAGTTGATAGATTGATGTTATTTATAATAAATCAATACTCCCT  286

seq1  TCATTTTACCTCCATCCATCTTACCCAACTCTCTTAAAATTCAGTTAAGA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTACCTCCATCCATCTTACCCAACTCTCTTAAAATTCAGTTAAGA  336

seq1  GTACTAGCCTGTGGCTGGGAGGGCCTGTGTCTTATTCTTTACTGCTTCCC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTAGCCTGTGGCTGGGAGGGCCTGTGTCTTATTCTTTACTGCTTCCC  386

seq1  CAGAGGCAAGTGTGTTACCTGGAATGCAGTAGACTCAAGGAATGGACCAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGCAAGTGTGTTACCTGGAATGCAGTAGACTCAAGGAATGGACCAT  436

seq1  TCAGCAATACTACCAGTGGTGGCAGGTTGGAAATGGGGAGGGGGGAAGTA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAATACTACCAGTGGTGGCAGGTTGGAAATGGGGAGGGGGGAAGTA  486

seq1  TGCAAGTTTCAGATGAAGGGACAAATTGTGAAAAAAAAATTAACCCCTCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGTTTCAGATGAAGGGACAAATTGTGAAAAAAAAATTAACCCCTCT  536

seq1  TGACATTGGTATTGATCACCAATTGTAGAATTATAGAAAAAGTCCCACAT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATTGGTATTGATCACCAATTGTAGAATTATAGAAAAAGTCCCACAT  586

seq1  GAATGCAAAAAGGAGCCAGCAGTAGTTCTCCATTCCCTGAGAGCCACATA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCAAAAAGGAGCCAGCAGTAGTTCTCCATTCCCTGAGAGCCACATA  636

seq1  TGAAAAACACTCCTCTTTTTTGACAGGGTTAAGATTGTGATATAAAGCAC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAACACTCCTCTTTTTTGACAGGGTTAAGATTGTGATATAAAGCAC  686

seq1  ATGTCTGGAATTTAGTAGACATTTGATACAAACATTTAAGATACTCTGAC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGGAATTTAGTAGACATTTGATACAAACATTTAAGATACTCTGAC  736

seq1  AAACAAAGCTACCATGTGCACTGGGTGATAGCATGCTTCAGTACCCAGAG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAGCTACCATGTGCACTGGGTGATAGCATGCTTCAGTACCCAGAG  786

seq1  AGGCCTGACTAATGAACTGCCCATCAACCTCCAGGGAAATCTCTGACAGC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTGACTAATGAACTGCCCATCAACCTCCAGGGAAATCTCTGACAGC  836

seq1  ATGTCACCCTGCTCTATCCTTGTCCTTATCCCATTTCAGGTACTTAATTG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCACCCTGCTCTATCCTTGTCCTTATCCCATTTCAGGTACTTAATTG  886

seq1  ATGACATGAACAGAAATGTGGAAGGCACAGTACTGACAGCAGACTACAGC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACATGAACAGAAATGTGGAAGGCACAGTACTGACAGCAGACTACAGC  936

seq1  TCCACAGGCCTGGAAGGGATAAGTAACAACACATGCCAATGTTGGATAAC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAGGCCTGGAAGGGATAAGTAACAACACATGCCAATGTTGGATAAC  986

seq1  AATCCTGTATGTCCTCAGAGCCTTCTTGCTCAAGAATCCCATCTCTGCTG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTGTATGTCCTCAGAGCCTTCTTGCTCAAGAATCCCATCTCTGCTG  1036

seq1  TTGCCTTACATCCTTCTATTCCTAGAAAGAGAAAGGATGAGGGACCTAAA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTTACATCCTTCTATTCCTAGAAAGAGAAAGGATGAGGGACCTAAA  1086

seq1  GTTCTGAGAGATGACGAGTGTCCCCATGTCCGTGCCAACTCTACTGAGCA  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGAGAGATGACGAGTGTCCCCATGTCCGTGCCAACTCTACTGAGCA  1136

seq1  TGAATTC  1153
      |||||||
seq2  TGAATTC  1143


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