BAC Information

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BAC

Clone NameB6Ng01-335G20
Chromosome15 (Build37)
Map Location 14,745,717 - 14,746,878
singlet/doubletsinglet
Overlap geneLOC100040024
Upstream geneLOC666708, LOC674819
Downstream geneLOC100040033, LOC100040046
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-335G20.bB6Ng01-335G20.g
ACCGA120658GA120659
length1,1551,165
definitionB6Ng01-335G20.b B6Ng01-335G20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatggtgctggc
acaactggtggttatcatgtagaagaatgcgaatcgatccatttctatct
ccttgtactaaggtcaaatctaagtggattaaggaactccacataaaacc
agagacactgaaacttatagaggagaaagaagggaaaagcctcgaagata
tgggtacaggggaaaaattcctgaaaaaacagcaatggcttgtgctgtaa
gatcaagaatcgataaatgggacctcataaaattgcaaagcttctgcaaa
gcaaaagacactgtcaataagacaaaagggccaccaacagattgggaaag
gatctttacctatcccaaatcggacagggtggtaattctgcctggagttc
ttttattgttgataataattttcgctatcctaggtttttttttttttttg
ttattccagatgtatttgcaaattcctctttctaactacataaagaattg
agttggaatttgatagggattgcattgaatctgtagattgcttatggcaa
gatggccatttttggccatttttactatattaatcctgccaatccatgag
catggagacctttccatcttctgagatcttcaatatctttcttcagagac
gtgaagttcttgtcaaacaaatatttcacttgattagtcagagtcacatc
aaggtattttatattattagtgactattgggaagggtgatgtttccctaa
tttctttctcagcctatttatccttggagtagaggtaggacacttatttg
ttttagttaaatttatatccagccactttgctgaagttttttttttatca
ggcttgggaattctgtctttgaatttttgctgtcactttagtatacatca
tatttgcaaatagtgatattttgactactttctaattttgtatcctttga
ctccttttgtttctaatgctctggctagggactcaattatattatacaga
aataggagagagtgagcagctttgttctagtcccttgtttagtgagatgc
ttcagttcactcactagtggaatgctggctaactggattgcctctatata
tggct

gaattcttagacattattaaaaaacaataaaaagaaagatgtgagtagct
ctagttgagatgtttcgggtggtaggagttgtttttttaaaagtgtttta
tttatatattttaatatatactttgaatagagtgtgagtgattgtatatt
tcagagtttaagcaaatgcttatgaataaccagacaaccaagtcatgcat
acaagtatgtacaaaggcatttactttgttaataatttctcattaattta
gcagaattattcccacattggtaattccatgtcttaatttttttgtttat
taaaatacagtaggctgtatgctcacaagttaaaggagacattctagatt
tacataaaaaattctcaaataccttaaaattttaaatttaatttcttttc
ctgagaaatatcttgcagtgtgtacattttgtaccagaaattattctcac
atatcataatcatatgtaaaatacatatgaacatttctatgctgagagta
agtaacagagtttttctctaaaagaattatggattaagttttataaaaga
aaataataatgtcattgttaatgtcctgtatttataattttattattggc
tccataggttttgactttggtttgttttagttttggttttggttttggtt
tggatttaggttttcagcaataggattgaattaagaaatctaattaaaaa
ggaaaaaaaaaagaaattttgtatgctaagcctgacctacatcccaagac
caagagaaataagatattacaatctgtcattttatcatttatcaacttgg
tacagattaaacagacataaattattctggttttttttttttttgctagt
tgcattccttctcagctgcaatcacatattaattatatttaaataatttt
gggtcaatataatacccttacatcttataatacgaagtgtaacttgtaaa
aatgagttgttttacatttataaaatttataattagtaaaaaattatgtt
tctacatagataccaagaattgtttgtatattattcagttatcacataac
caatcagataacttttctcagacaagaattgttttagtttgcttaaacat
ccctatggtatttgctagatagaaaagtaccgtgctttatttatttttct
cacacctgaaacaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_14745717_14746878
seq2: B6Ng01-335G20.g_67_1231

seq1  GAATTCTTAGACATTATTAAAAAACAATAAAAAGAAAGATGTGAGTAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGACATTATTAAAAAACAATAAAAAGAAAGATGTGAGTAGCT  50

seq1  CTAGTTGAGATGTTTCGGGTGGTAGGAGTTGTTTTTTTAAAAGTGTTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTGAGATGTTTCGGGTGGTAGGAGTTGTTTTTTTAAAAGTGTTTTA  100

seq1  TTTATATATTTTAATATATACTTTGAATAGAGTGTGAGTGATTGTATATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATATTTTAATATATACTTTGAATAGAGTGTGAGTGATTGTATATT  150

seq1  TCAGAGTTTAAGCAAATGCTTATGAATAACCAGACAACCAAGTCATGCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGTTTAAGCAAATGCTTATGAATAACCAGACAACCAAGTCATGCAT  200

seq1  ACAAGTATGTACAAAGGCATTTACTTTGTTAATAATTTCTCATTAATTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTATGTACAAAGGCATTTACTTTGTTAATAATTTCTCATTAATTTA  250

seq1  GCAGAATTATTCCCACATTGGTAATTCCATGTCTTAATTTTTTTGTTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAATTATTCCCACATTGGTAATTCCATGTCTTAATTTTTTTGTTTAT  300

seq1  TAAAATACAGTAGGCTGTATGCTCACAAGTTAAAGGAGACATTCTAGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATACAGTAGGCTGTATGCTCACAAGTTAAAGGAGACATTCTAGATT  350

seq1  TACATAAAAAATTCTCAAATACCTTAAAATTTTAAATTTAATTTCTTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAAAAAATTCTCAAATACCTTAAAATTTTAAATTTAATTTCTTTTC  400

seq1  CTGAGAAATATCTTGCAGTGTGTACATTTTGTACCAGAAATTATTCTCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAAATATCTTGCAGTGTGTACATTTTGTACCAGAAATTATTCTCAC  450

seq1  ATATCATAATCATATGTAAAATACATATGAACATTTCTATGCTGAGAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCATAATCATATGTAAAATACATATGAACATTTCTATGCTGAGAGTA  500

seq1  AGTAACAGAGTTTTTCTCTAAAAGAATTATGGATTAAGTTTTATAAAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACAGAGTTTTTCTCTAAAAGAATTATGGATTAAGTTTTATAAAAGA  550

seq1  AAATAATAATGTCATTGTTAATGTCCTGTATTTATAATTTTATTATTGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATAATGTCATTGTTAATGTCCTGTATTTATAATTTTATTATTGGC  600

seq1  TCCATAGGTTTTGACTTTGGTTTGTTTTAGTTTTGGTTTTGGTTTTGGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATAGGTTTTGACTTTGGTTTGTTTTAGTTTTGGTTTTGGTTTTGGTT  650

seq1  TGGATTTAGGTTTTCAGCAATAGGATTGAATTAAGAAATCTAATTAAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTTAGGTTTTCAGCAATAGGATTGAATTAAGAAATCTAATTAAAAA  700

seq1  GGAAAAAAAAAAGAAATTTTGTATGCTAAGCCTGACCTACATCCCAAGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAAAAAAGAAATTTTGTATGCTAAGCCTGACCTACATCCCAAGAC  750

seq1  CAAGAGAAATAAGATATTACAATCTGTCATTTTATCATTTATCAACTTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGAAATAAGATATTACAATCTGTCATTTTATCATTTATCAACTTGG  800

seq1  TACAGATT-AACAGACATAAATTATTCTGGTTTTTTTTTTTTTTTGCTAG  849
      |||||||| ||||||||||||||||||||| |||||||||||||||||||
seq2  TACAGATTAAACAGACATAAATTATTCTGG-TTTTTTTTTTTTTTGCTAG  849

seq1  TTGCATTCC-TCTCAGCTGCAATCACATATTAATTATATTT-AATAATTT  897
      ||||||||| ||||||||||||||||||||||||||||||| ||||||||
seq2  TTGCATTCCTTCTCAGCTGCAATCACATATTAATTATATTTAAATAATTT  899

seq1  T-GGTCAATATAATAACCTTACATC-TATTATACGAAGTGTAACTTGTAA  945
      | ||||||||||||| ||||||||| ||| ||||||||||||||||||||
seq2  TGGGTCAATATAATACCCTTACATCTTATAATACGAAGTGTAACTTGTAA  949

seq1  AAATAAAGTTGTTTTACA-TTATAAAATTTAATAATTAGTAAAAAATTAT  994
      ||||  |||||||||||| ||||||||||| |||||||||||||||||||
seq2  AAAT-GAGTTGTTTTACATTTATAAAATTT-ATAATTAGTAAAAAATTAT  997

seq1  GTATCTACATAGATACCAA-AAATGTTTGTAATATATTAAGTTA-CACAT  1042
      || |||||||||||||||| || ||||||||   |||| ||||| |||||
seq2  GTTTCTACATAGATACCAAGAATTGTTTGTATATTATTCAGTTATCACAT  1047

seq1  AACAAAATCAGATAACTTTTTCTCAG-CAAGATTTGTTTTTATTTTGCTT  1091
      |||  ||||||||||| ||||||||| ||||| ||| ||||| |||||||
seq2  AAC-CAATCAGATAAC-TTTTCTCAGACAAGAATTG-TTTTAGTTTGCTT  1094

seq1  TAATACTTTCTAT-GTATTTGTTTTAGAT-GAGAAGTAC--TGCTTTTAT  1137
       || | |  |||| |||||||   ||||| || ||||||  ||| |||||
seq2  AAACA-TCCCTATGGTATTTG--CTAGATAGAAAAGTACCGTGC-TTTAT  1140

seq1  TTATTTTTTTCAAAACTGAAACACA  1162
      |||||||| ||| | ||||||||||
seq2  TTATTTTTCTCACACCTGAAACACA  1165


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