BAC Information

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BAC

Clone NameB6Ng01-348I12
Chromosome15 (Build37)
Map Location 94,015,220 - 94,016,397
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043283, Glt8d3, Yaf2, Zcrb1, Pphln1, LOC627623, Prickle1, Zfp42-ps1, LOC100042627, LOC100042631
Downstream geneD630010B17Rik, Adamts20, Pus7l, Irak4, Twf1, Tmem117, LOC100043315
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-348I12.bB6Ng01-348I12.g
ACCGA129800GA129801
length1,1621,162
definitionB6Ng01-348I12.b B6Ng01-348I12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactgaggatgctttgacaagaagtgcaggagtcaaggaaggcaa
ggtcactcttaggcagctgcatgtgtaaagtctataataaaacacaagtg
aactttctctggacactgagaattcctcagctttagtaccaaacatggta
cagaagatgggatacccatagaaagtagtcatgccatatctacagtcctc
ctaactcactgtagagcagccaccccaagttattggtggtaagaatcaac
ataaagcttttgcatattcatccaatgggatgaaaacctccaaatgatga
atgggaactccctcttataattgcatgggatttgtattttgttttggtga
agtattaaaacagaaatctcagaaacataaaaccaaacattataatgggt
tgttgagtgcactagtgagaaattcgccatgcgtagctttgactctgact
cccattgtcggtctacagaagaaatagtgccatgccattcacggttcaga
acatttaccatttcctaaaggacagaacactaactttccaagacactgtt
cccagatggtgcaataaatgaatctttttcagagtactcaaccattctgt
aaggccagctgcttgtgggaaatggttgcttcagaaggacagcaaattta
tgagcatcgcctctggagcgtgtatctttgtaactgagatgtgttgtaag
atatgataatgacacaaaacgcatccctgaatccactgacagtgctttgg
caggaaagtcaaggttatacttagactaagcatcttctaacaggaagaaa
ttggtgcaggttaaatagcccttctcccaaatggttcaagaccagagtgt
tttgagcctttttttcccctttttccttaagggctatttccatataaaca
aggaaacagtttgaagatgaaaagcaagtgtaaacagaaaattcagttat
gttttattatacagtttatacatgcagctgtctttttgacaatattcctg
aaagatgtgagggagcatagattcacaccaggtatggatccatgactgac
tcacataatatgtacacaaagtcagctgagtgacatgagtttagtggggt
actacgaataatgggggtagaagtacttatgcaagtacactcaagagacc
agtcaatgccaa
gaattctttggtgaaatatcaaagttattataatttccatccaatggata
tggatgacgaacactttgtaagatactttgtagccattattctttcttct
attaatagctgtgtgtaatccctagatcatcatttttgggcgggtgttct
ttatatagtcaggatgttaatcttctatcgtatgtatagctgagaaagct
tctctcccattctgtgcacttcttagctatacagaagctttagagttcat
gaggcccctccccgttgtagatccttgtccttaattccttggcaaatggg
gtcctgttcaggatgtcctttcttccacctatatcatgtaggatatgcct
tatgtttttctcctagcagtttttagtgtttcaaattccagctttctttg
atctgcctgaatccagttttgtgcagagtgattgatatgggtctaatgtc
attctcctgcatgcgggatccagtttttcatggcccatttgttaaagctg
ctgtcttttctccagaggatcttttcttctttgtgagataaccagatggc
tgtagttattgctactcattttaggcaggctgtttaattccattgttctg
cacatttgtctctgtgcagcaccatattgtttttattaatacagatctat
aatgtatcttgaagtgtgggatatcaacccctctagtattctttctgctc
aagattgctttgcttatctttagtcttttctggcaccatgtgaattttag
gattcctctctatttctgcaaagaatgctgtgcacatattgagtagaact
gcactaagtttgtaaagtgcttttataggatggtcatagtcacaatattc
attccactggctcaggaactcggttcattctttccattttctaaaatgtt
ttcaccctcttcggaaatttggagttttcattgtagagtctttcatatcc
ttggctacttaatttccaagatgttcttattgcttttgctctgattgtag
gtgggaggttgtattattatgaacttcaaaaacttgtactctttgaggtt
gggaaatataagtaataggatgttttttcttgaatcatctaacttaccca
agttaaccaatctgagcgactcagcaagagcaggcttgtccgaggattat
agaatattctcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_94015220_94016397
seq2: B6Ng01-348I12.b_46_1207

seq1  GAATTCACTGAGGATGCTTTGACAAGAAGTGCAGGAGTCAAGGAAGGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGAGGATGCTTTGACAAGAAGTGCAGGAGTCAAGGAAGGCAA  50

seq1  GGTCACTCTTAGGCAGCTGCATGTGTAAAGTCTATAATAAAACACAAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCACTCTTAGGCAGCTGCATGTGTAAAGTCTATAATAAAACACAAGTG  100

seq1  AACTTTCTCTGGACACTGAGAATTCCTCAGCTTTAGTACCAAACATGGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTCTCTGGACACTGAGAATTCCTCAGCTTTAGTACCAAACATGGTA  150

seq1  CAGAAGATGGGATACCCATAGAAAGTAGTCATGCCATATCTACAGTCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGATGGGATACCCATAGAAAGTAGTCATGCCATATCTACAGTCCTC  200

seq1  CTAACTCACTGTAGAGCAGCCACCCCAAGTTATTGGTGGTAAGAATCAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTCACTGTAGAGCAGCCACCCCAAGTTATTGGTGGTAAGAATCAAC  250

seq1  ATAAAGCTTTTGCATATTCATCCAATGGGATGAAAACCTCCAAATGATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGCTTTTGCATATTCATCCAATGGGATGAAAACCTCCAAATGATGA  300

seq1  ATGGGAACTCCCTCTTATAATTGCATGGGATTTGTATTTTGTTTTGGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAACTCCCTCTTATAATTGCATGGGATTTGTATTTTGTTTTGGTGA  350

seq1  AGTATTAAAACAGAAATCTCAGAAACATAAAACCAAACATTATAATGGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTAAAACAGAAATCTCAGAAACATAAAACCAAACATTATAATGGGT  400

seq1  TGTTGAGTGCACTAGTGAGAAATTCGCCATGCGTAGCTTTGACTCTGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAGTGCACTAGTGAGAAATTCGCCATGCGTAGCTTTGACTCTGACT  450

seq1  CCCATTGTCGGTCTACAGAAGAAATAGTGCCATGCCATTCACGGTTCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTGTCGGTCTACAGAAGAAATAGTGCCATGCCATTCACGGTTCAGA  500

seq1  ACATTTACCATTTCCTAAAGGACAGAACACTAACTTTCCAAGACACTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTACCATTTCCTAAAGGACAGAACACTAACTTTCCAAGACACTGTT  550

seq1  CCCAGATGGTGCAATAAATGAATCTTTTTCAGAGTACTCAACCATTCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGATGGTGCAATAAATGAATCTTTTTCAGAGTACTCAACCATTCTGT  600

seq1  AAGGCCAGCTGCTTGTGGGAAATGGTTGCTTCAGAAGGACAGCAAATTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCAGCTGCTTGTGGGAAATGGTTGCTTCAGAAGGACAGCAAATTTA  650

seq1  TGAGCATCGCCTCTGGAGCGTGTATCTTTGTAACTGAGATGTGTTGTAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCATCGCCTCTGGAGCGTGTATCTTTGTAACTGAGATGTGTTGTAAG  700

seq1  ATATGATAATGACACAAAACGCATCCCTGAATCCACTGACAGTGCTTTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATAATGACACAAAACGCATCCCTGAATCCACTGACAGTGCTTTGG  750

seq1  CAGGAAAGTCAAGGTTATACTTAGACTAAGCATCTTCTAACAGGAAGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAAGTCAAGGTTATACTTAGACTAAGCATCTTCTAACAGGAAGAAA  800

seq1  TTGGTGCAGGTTAAATAGCCCTTCTCCCAAATGGTTCAAGACCAGAGTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGCAGGTTAAATAGCCCTTCTCCCAAATGGTTCAAGACCAGAGTGT  850

seq1  TTTGAGCCTTTTTTTCCCCTTTTTCCTTAAGGGCTATTTCCATATAAACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGCCTTTTTTTCCCCTTTTTCCTTAAGGGCTATTTCCATATAAACA  900

seq1  AGGAAACAGTTTGAAGATGAAAAGCAAGTGTAAACAGAAAATTCAGTTAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAACAGTTTGAAGATGAAAAGCAAGTGTAAACAGAAAATTCAGTTAT  950

seq1  GTTTTATTATACAGTTTATACATGCAGCTGTC-TTTTGACAATATTCCTG  999
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GTTTTATTATACAGTTTATACATGCAGCTGTCTTTTTGACAATATTCCTG  1000

seq1  AAAGAATGTGAGGGAGCATAGATTCACACCAGGTATGGATCCAATGACTG  1049
      |||| ||||||||||||||||||||||||||||||||||||| |||||||
seq2  AAAG-ATGTGAGGGAGCATAGATTCACACCAGGTATGGATCC-ATGACTG  1048

seq1  ACTCACAT-ATATGTACCACCAAAAGTCCAGCTGAGTGAACCAATGAGTT  1098
      |||||||| ||||||| |||  ||||| |||||||||||    ||||| |
seq2  ACTCACATAATATGTA-CAC--AAAGT-CAGCTGAGTGA---CATGAG-T  1090

seq1  TTAGTGGGGTTACTTACAGAATAATGGGGGTAGAAGTTACTTATGCAAAG  1148
      ||||||||| ||| ||| |||||||||||||||||| |||||||||||  
seq2  TTAGTGGGG-TAC-TAC-GAATAATGGGGGTAGAAG-TACTTATGCAA--  1134

seq1  TTACAACTCAAAGAGACCAGTCATTGCCAA  1178
       ||| |||| ||||||||||||| ||||||
seq2  GTAC-ACTC-AAGAGACCAGTCAATGCCAA  1162