Query= MSMg01no047_j10.b1 MSMg01no047_j10.b1 CHROMAT_FILE:
MSMg01no047_j10.b1 PHD_FILE: MSMg01no047_j10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:07:57 2005
(519 letters)
>mm_chr15_22880799_22881715
Length = 917
Score = 901 bits (466), Expect = 0.0
Identities = 507/530 (95%), Gaps = 17/530 (3%)
Strand = Plus / Plus
Query: 5 gaattctcataattgtcactcctgcttttgttac-caatctatggatcctgtaaccaagt 63
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 190 gaattctcataattgttactcctgcttttgttacacaatctatggatcctgtaaccaagt 249
Query: 64 gtcatcacttccattaatatatataatattactacatattattaattttatgtattaata 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gtcatcacttccattaatatatataatattactacatattattaattttatgtattaata 309
Query: 124 tattaaaaacatattaaatgtgtgtgtgtgtgtgtgtgtgt--------------attaa 169
||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 310 tattaaaaacatattaaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtattaa 369
Query: 170 tcatcagagtcatttatcccttctccttccttctctgttcctaaggattccctcacccat 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tcatcagagtcatttatcccttctccttccttctctgttcctaaggattccctcacccat 429
Query: 230 tacccagttcttgtttgggtgtatgctgaggtcatatatatggatatatactgggtataa 289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tacccagttcttgtttgggtgtatgctgaggtcatatatatggatatatactgggtataa 489
Query: 290 ctttagcttctcaaaatatctcagcacattttttttttactattgttaattaagcctctt 349
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 490 ctttagcttctcaaaatatctcagcacatttttttt--actattgttaattaagcctctt 547
Query: 350 aagtttacttcctatatgtgtaaagcatgaaaaattcaaatacttataggtcagaatgca 409
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 aagtttacttcctagatgtgtaaagcatgaaaaattcaaatacttataggtcagaatgca 607
Query: 410 cattgtctaaaagttactaatcagtgcgatattaggtaaatatcacagagttctcagttg 469
||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 608 gattgtctaaaagttagtaatcagtgcgatattaggcaaatatcacagagttctcagttg 667
Query: 470 ttatgcatttatttattttgcttctgacatttcaatgaactcttcaaaat 519
||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 ttatgtatttatttattttgcttctgacatttcaatgaactcttcaaaat 717
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 917
Length adjustment: 10
Effective length of query: 509
Effective length of database: 907
Effective search space: 461663
Effective search space used: 461663
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no047_j10.g1 MSMg01no047_j10.g1 CHROMAT_FILE:
MSMg01no047_j10.g1 PHD_FILE: MSMg01no047_j10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:07:57 2005
(298 letters)
>mm_chr15_23037085_23037782
Length = 698
Score = 545 bits (282), Expect = e-160
Identities = 294/298 (98%), Gaps = 1/298 (0%)
Strand = Plus / Minus
Query: 1 aaaaaagtgataaagaaaaagaactctgcatagaaagtcactgaagcaaggtatcacaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 aaaaaagtgataaagaaaaagaactctgcatagaaagtcactgaagcaaggtatcacaca 282
Query: 61 gaaattggttttctctatttctgtttcatgggaattttctggtaactataataggcataa 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 281 gaaattggttttctctatttctgtttcatgggaattttctggtaactataatagacataa 222
Query: 121 ttttatttactagtttgtttgttgttttgtttttttctgcttcttttgctttgttttatt 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 221 ttttatttactagtttgtttgttgttttg-ttttttctgcttcttttgctttgttttatt 163
Query: 181 tttgtttttatttatttttgagaaaatgtctctctatgtagatctgcctgtcctgttctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 162 tttgtttttatttatttttgagaaaatgtctctctatgtagatctgcctgtcctggtcct 103
Query: 241 caatctgtagagccaaatgcccttgaactcacagatctgacttcctctgcctcccaag 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 caatctgtagagccaaatgcccttgaactcacagatctgacttcctctgcctcccaag 45
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 698
Length adjustment: 9
Effective length of query: 289
Effective length of database: 689
Effective search space: 199121
Effective search space used: 199121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
