Query= MSMg01no049_k15.b1 MSMg01no049_k15.b1 CHROMAT_FILE:
MSMg01no049_k15.b1 PHD_FILE: MSMg01no049_k15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:11:55 2005
(526 letters)
>mm_chr15_67594202_67595126
Length = 925
Score = 872 bits (451), Expect = 0.0
Identities = 508/527 (96%), Gaps = 3/527 (0%)
Strand = Plus / Plus
Query: 1 ctccattgtgtaagtgtacctcattttctgtatctattcctctgttgaaggacatctggg 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctccattgtgtaagtatacctcattttctgtatctattcctctgttgaaggacatctggg 260
Query: 61 ttccttccagcttctggctattataaaaaaggctgctatgaacatagtggagcatatgtc 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttctttccagcttctggctattataaaaaaggctgctatgaacatagtggagcatatgtc 320
Query: 121 cttattacctgttggagcatcttctaggcatatgcccaggagtggtatagctgggtactc 180
||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 321 cttattacctgttggagaatcttctaggcatatgcccaggagtagtatagctgggtactc 380
Query: 181 aggtagtactatgtccaatatttttttgaggaactgccaaactgatttccagagtggttg 240
||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 381 aggtagtactatgtccaatttttttttgaggaattgccaaactgatttccagagtggttg 440
Query: 241 catcagcttgtagttccatcagcaatggaagagtgttcctctttctccacatccttgcca 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 441 catcagcttgtagttccatcagcaatggaagagcgttcctctttctccacatctttgcca 500
Query: 301 gtatctgctgtcacct-aagcttttgatcttaatatttctagttcaacattttcttgtta 359
|||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||
Sbjct: 501 gtatctgctgtcacctgaat-ttttgatcttaatatttctagtttaacattttcttgtta 559
Query: 360 tttattctttctcatttcacaattggttgtcattcaaagacaaaatttctgtgtactttg 419
|||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 560 tttattctgtctcatttcacaattggttgttactcaaagacaaaatttctgtgtactttg 619
Query: 420 cctttcacaactttgaaaaactcactgattgtctttagaggtcttctttattttgtattt 479
|||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 620 cctttcacaactttgacaaactcactgattgtctttagaggttttctttattttgtattt 679
Query: 480 aaggaatctcggtgaatggttacaagaaaatattagattctggacac 526
||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 680 aagtaatct-ggtgaatggttacaagaaaatattagattctggacac 725
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 925
Length adjustment: 10
Effective length of query: 516
Effective length of database: 915
Effective search space: 472140
Effective search space used: 472140
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no049_k15.g1 MSMg01no049_k15.g1 CHROMAT_FILE:
MSMg01no049_k15.g1 PHD_FILE: MSMg01no049_k15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:11:55 2005
(536 letters)
>mm_chr15_67671687_67672622
Length = 936
Score = 955 bits (494), Expect = 0.0
Identities = 524/534 (98%)
Strand = Plus / Minus
Query: 1 gacaccaaaaaagaaccagcagcagattgcacacagatgccactacagagggttctttgg 60
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 gacaccaaaaaagagtcagcagcagattgcacacagatgccactacagagggttctttgg 675
Query: 61 tgagatttgtttttttggccaagcaaggcgcaggaaataaagtggaaaatgactttcaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 tgagatttgtttttttggccaagcaaggcgcaggaaataaagtggaaaatgactttcaca 615
Query: 121 gagaatgtttgtagtgattatctctgcagaaaaacatctacccagttcaaaatctactct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 gagaatgtttgtagtgattatctctgcagaaaaacatctacccagttcaaaatctactct 555
Query: 181 cacaaatctaattcttgttctatgcatagagaatctctggtgagggggtgcatggtgaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 cacaaatctaattcttgttctatgcatagagaatctctggtgagggggtgcatggtgaat 495
Query: 241 ttatcagttggagtgtgataaacagctgatgtttctcttccatgatgccatttcttatgc 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 494 ttatcagttggagtgtgataaacagctgatgtttctcttccatgatgccatttcagatgc 435
Query: 301 tcaaggtgtcaaatttcatcatagttaatgcaattgatgcctatttctcaatttgttaaa 360
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 434 tcaaggtgtcaaatttcctcatagttaatacaattgatgcctatttctcaatttgttaaa 375
Query: 361 attgaaggtataaaatgatgcacaatatgccttggaaaataagggagaaagaagactcaa 420
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 attgaaggtataaaatgatacacaatatgccttggaaaataagggagaaagaagactcaa 315
Query: 421 attaaggcagggctagttcccttttttccacaaggcatcctccaggatttctctgattta 480
||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 314 attaaggtagggctagttcccttttttccacaaggtatcctccaggatttctctgattta 255
Query: 481 gtgcttacctttagtcatgccaggttcccactagactgtatgtagaagaccatg 534
|||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 gtgcttacatttagtcatgccaggttcccactagactgtatgtagaagaccatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 936
Length adjustment: 10
Effective length of query: 526
Effective length of database: 926
Effective search space: 487076
Effective search space used: 487076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
