Query= MSMg01no051_c11.b1 MSMg01no051_c11.b1 CHROMAT_FILE:
MSMg01no051_c11.b1 PHD_FILE: MSMg01no051_c11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:50:26 2005
(474 letters)
>mm_chr15_69832956_69833829
Length = 874
Score = 770 bits (398), Expect = 0.0
Identities = 449/466 (96%), Gaps = 2/466 (0%)
Strand = Plus / Plus
Query: 9 gaattcttaattttgatttcttcttttatgtgctcaaatttctgcttaaacatggtttta 68
||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 209 gaattcttaattttgttttcttattttatgtgctcaaatttctgcttaagcatggtttta 268
Query: 69 ttgatttgtaatgtttattgtcatgaaccatcagatccccatggtcattttaaacacaat 128
|||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 269 ttgatttgtaatgtgtattgtcatgaaccatcagatccccatggtcattttaatcacaat 328
Query: 129 gtgttggcacttcaatatttatatctcctgagagagttctgttttcttttgact-tttga 187
| ||||||| |||||||||||||||||||||| ||||||||||||||||||| | |||||
Sbjct: 329 gcgttggcatttcaatatttatatctcctgagggagttctgttttcttttga-tgtttga 387
Query: 188 gacaggggttctctttgtagcccttactgtcctagaattcactgtgtagaccaggctggc 247
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gacaggggttctctttgtagtccttactgtcctagaattcactgtgtagaccaggctggc 447
Query: 248 ctctagaaattcacctgcttctgcctcagaaaaatatataacacattaagtttaagggaa 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ctctagaaattcacctgcttctgcctcagaaaaatatataacacattaagtttaagggaa 507
Query: 308 aaaaacctacactagcaaaaattttaattgaatgccatgaaattatctgcagattatttg 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 aaaaacctacactagcaaaaattttaattgaatgccatgaaattatctgcagattatttg 567
Query: 368 agatttctgatgctgtcttcttcctcacttagagtctatttcctcttcttctgaacagtt 427
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 568 agatttctgatgctgtcttcttcctcacttagagtttattttctcttcttctgaacagtt 627
Query: 428 caagctaggaccagctcctctttcattcattcggatatgagtctta 473
|||| ||||| |||||||||||||||| ||| ||||||||||||||
Sbjct: 628 caagttaggatcagctcctctttcatttatttggatatgagtctta 673
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 874
Length adjustment: 10
Effective length of query: 464
Effective length of database: 864
Effective search space: 400896
Effective search space used: 400896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no051_c11.g1 MSMg01no051_c11.g1 CHROMAT_FILE:
MSMg01no051_c11.g1 PHD_FILE: MSMg01no051_c11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:50:26 2005
(317 letters)
>mm_chr15_69863046_69863759
Length = 714
Score = 410 bits (212), Expect = e-119
Identities = 247/260 (95%), Gaps = 3/260 (1%)
Strand = Plus / Minus
Query: 58 acacaaatggggactgaagagatggatgggatggtcgtcatcactagtcctcgagctggg 117
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 519 acacaaatggggactgaagagatggatgggatg---gtcatcactagtcctcgagctggg 463
Query: 118 agtatgcctaggagatgtgactattttctagcaggtgctgtgtgttcacagcggaaggct 177
|||||||||||||||||| |||||||||||||||||||||||||||||| | || |||||
Sbjct: 462 agtatgcctaggagatgtaactattttctagcaggtgctgtgtgttcacggtgggaggct 403
Query: 178 agaatgaatagggaatgtgaccttttgtgtacataagttcagctatgctggcctgattct 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 agaatgaatagggaatgtgaccttttgtgtacataagttcagctatgctggcctgattct 343
Query: 238 cctattttaaaaagataaagaaattcatgcatctgttaacaagcatgtcctcacaaacct 297
|||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||
Sbjct: 342 cctattttaaaaagataaagaaattcatgcttctgttaagaagtgtgtcctcacaaacct 283
Query: 298 caaacccacctaacaatacc 317
|||||| |||||| ||||||
Sbjct: 282 caaaccaacctaaaaatacc 263
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 714
Length adjustment: 9
Effective length of query: 308
Effective length of database: 705
Effective search space: 217140
Effective search space used: 217140
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|