Query= MSMg01no052_c23.b1 MSMg01no052_c23.b1 CHROMAT_FILE:
MSMg01no052_c23.b1 PHD_FILE: MSMg01no052_c23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:52:43 2005
(671 letters)
>mm_chr15_45425767_45426837
Length = 1071
Score = 1251 bits (647), Expect = 0.0
Identities = 662/667 (99%), Gaps = 2/667 (0%)
Strand = Plus / Plus
Query: 5 gaattctttaaagcctacccatgacaaaaatttttctaatattttcctacaagttaagac 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttaaagcctaaccatgacaaaaatttttctaatattttcctacaagttaagac 264
Query: 65 cattcctacatacatgatagtctttcctgacgtattgtcaattatattaaaaaaaatctt 124
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 265 cattcctacatacatgatagtctttcctgacgtattgttaattatattaaaaaaaatctt 324
Query: 125 tatatcattttcactgtttaaatatagcatcacttccttcagaagatttcctcattgctt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tatatcattttcactgtttaaatatagcatcacttccttcagaagatttcctcattgctt 384
Query: 185 gtgtccagaatgtacttttaagataccatcagtcactctggagatgagtctttcttcatg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtgtccagaatgtacttttaagataccatcagtcactctggagatgagtctttcttcatg 444
Query: 245 caaaattaattatttttatttgtaaatatttctataatagaatatctgatatatatgtaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 caaaattaattatttttatttgtaaatatttctataatagaatatctgatatatatgtaa 504
Query: 305 aatgtgtattgataagctcagagaatttccacttccaaagcaaatataccttttgaacct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aatgtgtattgataagctcagagaatttccacttccaaagcaaatataccttttgaacct 564
Query: 365 ggttattattctcaggatattgcatttt-ggggaaaaaaatcatattgagatgttttgat 423
|||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 565 ggttattattctcaggatattgcatttttggggaaaaaa-tcatattgagatgttttgat 623
Query: 424 gacttttatgctctgcaagaataacagtgggtagatggccactactcatacattttacaa 483
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gacttttatgttctgcaagaataacagtgggtagatggccactactcatacattttacaa 683
Query: 484 gatgttgtaagttttaaaagtgtgtgccatgcacatagttatcagacaaagctatcctca 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gatgttgtaagttttaaaagtgtgtgccatgcacatagttatcagacaaagctatcctca 743
Query: 544 gacatgtaatttaaagatgactaatcataaattagaattcaggacctttggttaaagcaa 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gacatgtaatttaaagatgactaatcataaattagaattcaggacctttggttaaagcaa 803
Query: 604 tgatataaaaaaatatttgatcatacaatgcctaatttagaaataccatttgtacttgca 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tgatataaaaaaatatttgatcatacaatgcctaatttagaaataccatttgtacttgca 863
Query: 664 ttgtttg 670
|||||||
Sbjct: 864 ttgtttg 870
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1071
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1061
Effective search space: 701321
Effective search space used: 701321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no052_c23.g1 MSMg01no052_c23.g1 CHROMAT_FILE:
MSMg01no052_c23.g1 PHD_FILE: MSMg01no052_c23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:52:43 2005
(604 letters)
>mm_chr15_45568692_45569694
Length = 1003
Score = 567 bits (293), Expect = e-165
Identities = 317/325 (97%), Gaps = 2/325 (0%)
Strand = Plus / Minus
Query: 281 atggtgattccaccagaggttcttttatccttgagaagagtttttgctatcctagg-ttt 339
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1003 atggtgattccaccagaggttcttttatccttgagaagagtttttgctatcctaggtttt 944
Query: 340 ttgttattccagatgcagttgcagattgctctttctaattctttgaagaattgagttgga 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 943 ttgttattccagatgcagttgcagattgctctttctaattctttgaagaattgagttgga 884
Query: 400 attttgatggggattacattgaatctgtagattgcttttggcaggatagccatttttaca 459
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883 attttgatggggattgcattgaatctgtagattgcttttggcaggatagccatttttaca 824
Query: 460 atgttgatcctgccaatccagttcttaatgtgtaacagatttaaagctataatagtcttt 519
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 823 atgttgatcctgccaatccagttctcaatgtgtaacagatttaaagctataatagtcttt 764
Query: 520 taaatatatagttactcaatgcatttatttttttcttttttaaacttatctattatctgt 579
|||||| ||||||| |||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 763 taaatacatagttattcaatgcatttatttttt-cttttttaaaattatctattatctgt 705
Query: 580 ctattaaagttattttcaaaaatat 604
|||||||| ||||||||||||||||
Sbjct: 704 ctattaaaattattttcaaaaatat 680
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1003
Length adjustment: 10
Effective length of query: 594
Effective length of database: 993
Effective search space: 589842
Effective search space used: 589842
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
