Query= MSMg01no053_j06.b1 MSMg01no053_j06.b1 CHROMAT_FILE:
MSMg01no053_j06.b1 PHD_FILE: MSMg01no053_j06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:32 2005
(162 letters)
>mm_chr15_95530824_95531389
Length = 566
Score = 248 bits (128), Expect = 2e-70
Identities = 157/168 (93%), Gaps = 8/168 (4%)
Strand = Plus / Minus
Query: 1 tggagaag-ggggagcacccaaggaggtgg-acaaggggagcattgggctctgaagacct 58
|||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 366 tggagaagtggggagcacccaaggaggtggaagaaggggagcattgggctctgaagacct 307
Query: 59 tctgcag-aattgtttgattgaa-cacttggggcagcaggcacaacattatagaaagaca 116
||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 306 tctgcagtaattgtttgattgaagcacttggggcagcaggcacaacattatagaaagaca 247
Query: 117 tgca--tgtctgaaggttcacagtgtgcatctggagtagctcccgtgg 162
|| | ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 246 --cacgtatctgaaggttcacagtgtgtatctggagtagctcccgtgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 162
Length of database: 566
Length adjustment: 8
Effective length of query: 154
Effective length of database: 558
Effective search space: 85932
Effective search space used: 85932
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no053_j06.g1 MSMg01no053_j06.g1 CHROMAT_FILE:
MSMg01no053_j06.g1 PHD_FILE: MSMg01no053_j06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:32 2005
(333 letters)
>mm_chr18_47380764_47381496
Length = 733
Score = 613 bits (317), Expect = e-180
Identities = 329/333 (98%)
Strand = Plus / Minus
Query: 1 tctgacaatccctcttctcttccagcatcagcctctgcaggctctccatgggatctggca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tctgacaatccctcttctcttccagcatcagcctctgcaggctctccatgggatctggca 423
Query: 61 tctctcactggtccatgagctccaacatccctcactggtctgcttacataaaagtttgct 120
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 422 tctctcactggtccatgagctccaacatccgtcactggtctgcttacataaaagcttgct 363
Query: 121 cactgcttgtgtccaaagctgagcaagtccagtaggaaaggaaatatttttataagcttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 cactgcttgtgtccaaagctgagcaagtccagtaggaaaggaaatatttttataagcttg 303
Query: 181 aacacagcacacagacacgatttacaatacgaggccaaagaaggcttgggatacaatcca 240
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 302 aacacagcacacagacacaatttacaagacgaggccaaagaaggcttgggatacaatcca 243
Query: 241 gacccaccccccaaaaaattgttttaaggtgactgtgtcctccccttgggggttcctaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gacccaccccccaaaaaattgttttaaggtgactgtgtcctccccttgggggttcctaga 183
Query: 301 gactgaaccaacaacaaaagagcataggtgggc 333
|||||||||||||||||||||||||||||||||
Sbjct: 182 gactgaaccaacaacaaaagagcataggtgggc 150
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 733
Length adjustment: 9
Effective length of query: 324
Effective length of database: 724
Effective search space: 234576
Effective search space used: 234576
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
