XXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAAAGAGGATCCGCGGAATT
CTTTGTTAACATCTATACCCCATTTTTAATAGGGTTATTTGATTCTCTAG
AGTCTAACTTCTTGAGTTCTTTGTATATATTGGATATTAACCCTCTATCA
GATGTAGGATTGGATTGGTAAAGATCTTTTCCCAATCTGTTGGTTGCCAT
TTTGTCCTATTGACAGTGTCCTTTCTGGCTGTTTATATTTTATTTGGGGG
GAATATCATTACATATTGGGTCACTTGATTATTCCTGCTTTTACCATGAG
TCCCTTTAGTTTTTTTCTATATATTTTTTTATTCCGTTGTCACCTTCTTT
CTTTTTATTGTCCCACCACTCTCTAGGATAAATTGTATAAATTATATACC
CATCATCTAAGACCTTGAATGGACCATTCCTGTAAAGAATCCAAGCTCCT
TATATGGGCAAGTGGAATTTAGAACCCAAAATGTGACCATCAAAAAAATG
GGTTTGATGTTACTCAAGTGTCACTATATGTAGGCTCTCTCACGCAATAG
AAGAACACACACACATGCACACATACATTCATACATATACATAAACATCC
ATACCCTTCCATACTAACATACACACAGATATTTTAAACTTATTCTTTTA
TATACCCACATACCCTCTTACTTATCAACTATACTCATACATACTTACAA
ACTCTTTCG

CGATTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAATGTCCAGATAAACTGTCCTTCA
GCTGCAATGGTCTTCTCTATATGCAAAGGCTCCTCAAAATACATAATTCA
ATCAGGCCTCCTGAAAAGTTACGGATATTATACTCCAAAGAGCTAAGAAA
TGAGTCAAAGCAAGTTATGCAATAAAAGGAAAATCAGAGTAGGATGGGGT
CATTATAACACTTTAAATATCACAAGGAGTCCTTAGTGAAATTTTTCAAT
TTTACTTTGTTTATAAATATATAGCATAAATTTATACATATGAGAATGTC
ACATGATAATCTATAATTAAGTCAATTTAAATATATAGAAAATGCAAAAT
GTTAAAAGCTCTGTGAATTTTATACAAAGAAACCAATTTAACATTAAGAA
ATAAAAATAAAACTATAAATAATGTATAATAATATATTAAATATAATATA
AAATTATAAAATAAAATGTAGGACTCAAAATGGACTATATAAGGCAAAAT
AGTCAAACTTTAGCTTCATGACACACAATAGATATGTTCATTTCAAAATA
AAGACTAATAAAATAAATTGAGCAACTTAATTTCCAAGTAAATCTGTAGA
AAGTGTGTGTTTAAAAAATAACAACAATAAAATTATCTGAAAAATAAACA
AGGA

Query= MSMg01no055_h12.g1 MSMg01no055_h12.g1 CHROMAT_FILE:
MSMg01no055_h12.g1 PHD_FILE: MSMg01no055_h12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:53 2005
         (628 letters)



>mm_chr15_54558321_54559346
          Length = 1026

 Score = 1164 bits (602), Expect = 0.0
 Identities = 622/630 (98%), Gaps = 4/630 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatgtccagataaactgtccttcagctgcaatggtcttctctatatgcaaaggctcctca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 aatgtccagataaactgtccttcagctgcaatggtcttctctatatgcaaaggctcctca 258

                                                                       
Query: 61  aaatacataattcaatcaggcctcctgaaaagttacggatattatactccaaagagctaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 aaatacataattcaatcaggcctcctgaaaagttacggatattatactccaaagagctaa 318

                                                                       
Query: 121 gaaatgagtcaaagcaagttatgcaataaaaggaaaatcagagtaggatggggtcattat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gaaatgagtcaaagcaagttatgcaataaaaggaaaatcagagtaggatggggtcattat 378

                                                                       
Query: 181 aacactttaaatatcacaaggagtccttagtgaaatttttcaattttactttgtttataa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 aacactttaaatatcacaaggagtccttagtgaaatttttcaattttactttgtttataa 438

                                                                       
Query: 241 atatatagcataaatttatacatatgagaatgtcacatgataatctataattaa--gtca 298
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||
Sbjct: 439 atatatagcataaatttatacatatgagaatgtcacatgataatctataattaaaagtca 498

                                                                       
Query: 299 atttaaatatatagaaaatgcaaaatgttaaaagctctgtgaattttatacaaagaaacc 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 atttaaatatatagaaaatgcaaaatgttaaaagctctgtgaattttatacaaagaaacc 558

                                                                       
Query: 359 aatttaacattaagaaataaaaataaaactataaataatgtataataatatattaaatat 418
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 559 aatttaacattaagaaataaaaataaaactataaataatgtacaataatatattaaatat 618

                                                                       
Query: 419 aatataaaattataaaataaaatgtaggactcaaaatggactatataaggcaaaatagtc 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 aatataaaattataaaataaaatgtaggactcaaaatggactatataaggcaaaatagtc 678

                                                                       
Query: 479 aaactttagcttcatgacacacaatagatatgttcatttcaaaataaagactaataaaat 538
           ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 679 aaactttagcttcatgacacacaataggtatattcatttcaaaataaagactaataaaat 738

                                                                       
Query: 539 aaattgagcaacttaatttccaagtaaatctgtagaaagtgtgtgtttaaaaaataacaa 598
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 739 aaattgagcaacttaatttccaagtaaatctgtagaaactgtgtgtttaaaaaataacaa 798

                                         
Query: 599 caataaaattatctgaaaaataaacaagga 628
           ||||||||||||||||||||  ||||||||
Sbjct: 799 caataaaattatctgaaaaa--aacaagga 826


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1026
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1016
Effective search space:   627888
Effective search space used:   627888
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)