Query= MSMg01no056_m20.b1 MSMg01no056_m20.b1 CHROMAT_FILE:
MSMg01no056_m20.b1 PHD_FILE: MSMg01no056_m20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:58:33 2005
(606 letters)
>mm_chr15_45793427_45794432
Length = 1006
Score = 638 bits (330), Expect = 0.0
Identities = 354/362 (97%)
Strand = Plus / Plus
Query: 5 gaattctgctctacccattttccttccattctgcaatttgtgcctttcttattatgtaaa 64
||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgctccagtcattttccttccattctgcaatttgtgcctttcttattatgtaaa 264
Query: 65 ttcttaatctcagagcaaaaaatgatgataaatatataattgttactttatattgttaaa 124
|||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 265 ttcttaatatcagagcaaaaaatgaagataaatatataattgttactttatattgttaaa 324
Query: 125 atatatatgattgaagatatgcatcttctatatattttcttgctgtttgatactattaaa 184
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ataaatatgattgaagatatgcatcttctatatattttcttgctgtttgatactattaaa 384
Query: 185 tgtaacttttatccagaagcatgaatgtaaacattggcaatgttatcaaacacttgaatg 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgtaacttttatccagaagcatgaatgtaaacattggcaatgttatcaaacacttgaatc 444
Query: 245 ttaggtatttgagaaagggttatactaagtaaattcttgtgagaggcagtgtgcctcaat 304
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 445 ttaggtatttgagaaagggttatactaagtaaattctggtgagaggcagtgtgcctcaat 504
Query: 305 tttattccttaaatgcccattcttacctgagtgcattctcctcactgatctcaactgttc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tttattccttaaatgcccattcttacctgagtgcattctcctcactgatctcaactgttc 564
Query: 365 at 366
||
Sbjct: 565 at 566
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1006
Length adjustment: 10
Effective length of query: 596
Effective length of database: 996
Effective search space: 593616
Effective search space used: 593616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no056_m20.g1 MSMg01no056_m20.g1 CHROMAT_FILE:
MSMg01no056_m20.g1 PHD_FILE: MSMg01no056_m20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:58:33 2005
(583 letters)
>mm_chr15_45936464_45937446
Length = 983
Score = 1089 bits (563), Expect = 0.0
Identities = 578/583 (99%), Gaps = 1/583 (0%)
Strand = Plus / Minus
Query: 1 actccattcatttggaatttaacataaactgtagtatcaatatgctgtttctgaagttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 actccattcatttggaatttaacataaactgtagtatcaatatgctgtttctgaagttaa 642
Query: 61 aaataaattccctactttagaagtattgtttctatgttacttcctcagttatgccttaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 aaataaattccctactttagaagtattgtttctatgttacttcctcagttatgccttaca 582
Query: 121 aatttccaatagtaggtcacccatgtttgtttctgacattttgtttttgatgtggaaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 aatttccaatagtaggtcacccatgtttgtttctgacattttgtttttgatgtggaaagt 522
Query: 181 gctaatgataaagggagcctggaaatatcaaaacagtatctaaggccagagttcactgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gctaatgataaagggagcctggaaatatcaaaacagtatctaaggccagagttcactgag 462
Query: 241 ctctaacttctaaaacagaactcagtgtgctttctcattctagtggggattttacttgga 300
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 ctctaacttctaaaacagagctcagtgtgctttctcattctagtggggattttacttgga 402
Query: 301 ataatagaaatttgataactatgatcctgagtatgtaagctaataaaaataatatctata 360
||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 401 ataatagaaatgtgataactatgatcctgaatatgtaagctaataaaaataatatctata 342
Query: 361 tacaagtgtattgtctatataaatctacttgattttaaaaatatgttgaactcaatataa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 tacaagtgtattgtctatataaatctacttgattttaaaaatatgttgaactcaatataa 282
Query: 421 tacccttctcagctagatactgagatttatttaacatttttcagaaataactttcatgta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 tacccttctcagctagatactgagatttatttaacatttttcagaaataactttcatgta 222
Query: 481 ttacaaagccttctctaaaagtaaaaaaaaaaataataataatagatttttccacatcct 540
|||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 221 ttacaaagccttctctaaaagt-aaaaaaataataataataatagatttttccacatcct 163
Query: 541 tgaacaatacttcaccccatggaaaccaaagatgtctgtgctt 583
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 tgaacaatacttcaccccatggaaaccaaagatgtctgtgctt 120
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 983
Length adjustment: 10
Effective length of query: 573
Effective length of database: 973
Effective search space: 557529
Effective search space used: 557529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
