Query= MSMg01no061_n22.b1 MSMg01no061_n22.b1 CHROMAT_FILE:
MSMg01no061_n22.b1 PHD_FILE: MSMg01no061_n22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:58 2005
(323 letters)
>mm_chr15_84246499_84247222
Length = 724
Score = 615 bits (318), Expect = e-180
Identities = 321/322 (99%), Gaps = 1/322 (0%)
Strand = Plus / Minus
Query: 3 gaattctcctgtcttc-atttcatgtttccaatttggcttcccagtctcttatctgttgt 61
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gaattctcctgtcttctatttcatgtttccaatttggcttcccagtctcttatctgttgt 274
Query: 62 ttgggtcagacttattttaatgtaaatattccaacaagaactgggttgtattgtcttttg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 ttgggtcagacttattttaatgtaaatattccaacaagaactgggttgtattgtcttttg 214
Query: 122 catacaaagaatgtcttagtttcttttcccattgctcagataagatcccctaactagaga 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 catacaaagaatgtcttagtttcttttcccattgctcagataagatcccctaactagaga 154
Query: 182 aatctaagggagaagggcttacttatatggctcacggttcctgggaacacagtccatcat 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 aatctaagggagaagggcttacttatatggctcacggttcctgggaacacagtccatcat 94
Query: 242 gacagagtcaacaaggcagcaggcagggaaagtctgtcaggaagagaaggaagctggttg 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 gacagagtcaacaaggcagcaggcagggaaagtctgtcaggaagagaaggaagctggttg 34
Query: 302 gccacattgtacctgggaagca 323
||||||||||||||||||||||
Sbjct: 33 gccacattgtacctgggaagca 12
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 724
Length adjustment: 9
Effective length of query: 314
Effective length of database: 715
Effective search space: 224510
Effective search space used: 224510
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no061_n22.g1 MSMg01no061_n22.g1 CHROMAT_FILE:
MSMg01no061_n22.g1 PHD_FILE: MSMg01no061_n22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:58 2005
(239 letters)
>mm_chr15_84052165_84052804
Length = 640
Score = 422 bits (218), Expect = e-122
Identities = 234/240 (97%), Gaps = 3/240 (1%)
Strand = Plus / Plus
Query: 1 ttcttggcaccaagttgggctatgtcacacactt-tgattcaagagtgtctcctgctcac 59
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 ttcttggcaccaagttgggctatgtcacacacttgtgattcaagagtgtctcctgctcac 260
Query: 60 acagctgttcggcagtcagcctctaccaatggtccactgtggtgtctgtgtgtccctgtg 119
| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atagctgttcagcagtcagcctctaccaatggtccactgtggtgtctgtgtgtccctgtg 320
Query: 120 tgtgtgaatgtgcatgtttttgtgtgtctatgttgtctgtctgtgtgtgtctgtgagtgt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtgtgaatgtgcatgtttttgtgtgtctatgttgtctgtctgtgtgtgtctgtgagtgt 380
Query: 180 gcgttgtgtgtttgtgtgtgtgtgtgtctgtgtgtccatgtgtgtgtctatgtgtctgcg 239
| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 gtgttgtgtgtttgtgtgtgtgtgt--ctgtgtgtccatgtgtgtgtctatgtgtctgcg 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 54
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 640
Length adjustment: 9
Effective length of query: 230
Effective length of database: 631
Effective search space: 145130
Effective search space used: 145130
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
