Query= MSMg01no062_p16.b1 MSMg01no062_p16.b1 CHROMAT_FILE:
MSMg01no062_p16.b1 PHD_FILE: MSMg01no062_p16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:08 2005
(309 letters)
>mm_chr15_99289034_99289739
Length = 706
Score = 516 bits (267), Expect = e-151
Identities = 297/311 (95%), Gaps = 9/311 (2%)
Strand = Plus / Plus
Query: 1 ttttattaatattgcttctctcttaggtgcttta---atgagacttaaaccccaattagt 57
||||||||||||||||||||||||||||| || |||||||||||| | |||||||
Sbjct: 201 ttttattaatattgcttctctcttaggtg---tacaaatgagacttaaagcaaaattagt 257
Query: 58 ccagtaaaagaacgggtgccctacaagaatgtagggtggtcaggttggctgggatgcatt 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ccagtaaaagaacgggtgccctacaagaatgtagggtggtcaggttggctgggatgcatt 317
Query: 118 taaggggtcctctctgaagaaggcattttagagtgggagtctaaagatggagaacttgaa 177
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 taaggggtcctctctgaagaaggcattttagagtgggagtctaaagatggagaacttgag 377
Query: 178 taggacccaggcaggaataaagacaagtgattggcaagaagctaattaccagagtgggat 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 taggacccaggcaggaataaagacaagtgattggcaagaagctaattaccagagtgggat 437
Query: 238 agcaagcaaatcctcttttgtagggggggggagggggcaatgcaagaggttttatctgga 297
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 438 agcaagcaaatcctcttttgtaggggggggg---gggcaatgcaagaggttttatctgga 494
Query: 298 aagcagaatga 308
|| ||||||||
Sbjct: 495 aaacagaatga 505
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 309
Length of database: 706
Length adjustment: 9
Effective length of query: 300
Effective length of database: 697
Effective search space: 209100
Effective search space used: 209100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no062_p16.g1 MSMg01no062_p16.g1 CHROMAT_FILE:
MSMg01no062_p16.g1 PHD_FILE: MSMg01no062_p16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:08 2005
(747 letters)
>mm_chr15_99389253_99390399
Length = 1147
Score = 619 bits (320), Expect = 0.0
Identities = 332/336 (98%)
Strand = Plus / Minus
Query: 1 ggggatgcaactccctcttcaggcctccaaaggcattgcatttacccgcacatacccaca 60
||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 336 ggggatgcaactccctcttcaggcctccaaaggcattgcatttacatgtacatacccaca 277
Query: 61 aagacatgtacataactaaaaatcattgtaagttttctttattaaaagagtgaagacttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aagacatgtacataactaaaaatcattgtaagttttctttattaaaagagtgaagacttt 217
Query: 121 tgcaataagtgtgaaaggtacatgcctataatcccaggactttcggaggtggaggcagag 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 216 tgcaataagtgtgaaaggtacatgcccataatcccaggactttcggaggtggaggcagag 157
Query: 181 gatcaggagttcaaggccagcctcagcctcatagcaagtttgaagccagcctataataca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 gatcaggagttcaaggccagcctcagcctcatagcaagtttgaagccagcctataataca 97
Query: 241 agagatattttatcaaaaacaaaataaacaacaaaaacttcaagaatgagaggcagcatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 agagatattttatcaaaaacaaaataaacaacaaaaacttcaagaatgagaggcagcatt 37
Query: 301 gtcaaatcatatgttgaatacattaaaatgtataag 336
||||||||||||||||||||||||||||||||||||
Sbjct: 36 gtcaaatcatatgttgaatacattaaaatgtataag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 747
Length of database: 1147
Length adjustment: 10
Effective length of query: 737
Effective length of database: 1137
Effective search space: 837969
Effective search space used: 837969
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
|
