Query= MSMg01no069_a17.b1 MSMg01no069_a17.b1 CHROMAT_FILE:
MSMg01no069_a17.b1 PHD_FILE: MSMg01no069_a17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:40 2005
(233 letters)
>mm_chr15_46323274_46323906
Length = 633
Score = 416 bits (215), Expect = e-121
Identities = 228/233 (97%), Gaps = 3/233 (1%)
Strand = Plus / Minus
Query: 1 ctagatgac-aatatgtctgtgtgtgtgtgtgtgtttatgtttgtgtgcatatgtgtctg 59
||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 ctagatgacaaatatgtc--tgtgtgtgtgtgtgtttatgtttgtgtgcatatgtgtctg 416
Query: 60 tctgtgtgtatgtgtgtgtttgttgtatagaagatatactggaacagcattaattaagat 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 tctgtgtgtatgtgtgtgtttgttgtatagaagatatactggaacagcattaattaagat 356
Query: 120 attcaaaaaatcagaatttatgaggaactaagtaaatctaaataaaataattttcccctc 179
|||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 355 attcaaaaaatcagaatttatgtggaaataagtaaatctaaataaaataattttcccctc 296
Query: 180 tttctttcttagctatttaaaatattgaaattaatataatatttaagtgccaa 232
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 tttctttcttagctatttaaaatattgaaattaatataatatttaagtgccaa 243
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 633
Length adjustment: 9
Effective length of query: 224
Effective length of database: 624
Effective search space: 139776
Effective search space used: 139776
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no069_a17.g1 MSMg01no069_a17.g1 CHROMAT_FILE:
MSMg01no069_a17.g1 PHD_FILE: MSMg01no069_a17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:40 2005
(233 letters)
>mm_chr15_46206397_46207029
Length = 633
Score = 420 bits (217), Expect = e-122
Identities = 229/233 (98%)
Strand = Plus / Plus
Query: 1 cttctaaaagtttaagactttctgaaattcaatcttttttttttacattttattaattgc 60
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttctaaaactttaacactttctgaaattcaatcttttttttttacattttattaattgc 260
Query: 61 tactgcagattttatggacttgaggaattggttttcaaaagaaaaagactatgagcaggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tactgcagattttatggacttgaggaattggttttcaaaagaaaaagactatgagcaggg 320
Query: 121 tatttatctctgtctagactatgtaatgcatcacaaagagagtaaaagaattggctacac 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatttgtctctgtctagactatgtaatgcatcacaaagagagtaaaagaattggctacac 380
Query: 181 aaaatctgtctcattattcatttgtctcaagatttctatcacattaactctgt 233
|||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaatctgtctcattagtcatttgtctcaagatttctatcacattaactctgt 433
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 633
Length adjustment: 9
Effective length of query: 224
Effective length of database: 624
Effective search space: 139776
Effective search space used: 139776
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
