Query= MSMg01no073_g06.b1 MSMg01no073_g06.b1 CHROMAT_FILE:
MSMg01no073_g06.b1 PHD_FILE: MSMg01no073_g06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:26 2005
(359 letters)
>mm_chr15_50372867_50373625
Length = 759
Score = 648 bits (335), Expect = 0.0
Identities = 347/351 (98%)
Strand = Plus / Plus
Query: 6 gaattctaaatgatctttaaaaagcattagcagtcatcactggagggaggttcagttgga 65
|||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 206 gaattctaaatgatatttaaaaagcattagcagtcatcacttgagggaggttcagttgga 265
Query: 66 tgctagacaaataagacacacttgaataaagattgcttgccaagctgtaatgcctaaatc 125
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 266 tgctagacaaataagacacacttgaagaaagattgcttgccaagctgtaatgcctaaatc 325
Query: 126 ctgagacttaaaccatgtgactattgcacatatgtgtatgtataactgtaactaacatca 185
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ctgagatttaaaccatgtgactattgcacatatgtgtatgtataactgtaactaacatca 385
Query: 186 tgacaataaaatatgcaatattgtaaactttcatgaataagtgataactgccaatgcata 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tgacaataaaatatgcaatattgtaaactttcatgaataagtgataactgccaatgcata 445
Query: 246 tttcaataaaaatatatcacttgatgagataaaaattacccctttgtgaacacacattga 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tttcaataaaaatatatcacttgatgagataaaaattacccctttgtgaacacacattga 505
Query: 306 ttatcactagagtgtgctaatataattactcttctgttctattttttatgt 356
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ttatcactagagtgtgctaatataattactcttctgttctattttttatgt 556
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 359
Length of database: 759
Length adjustment: 9
Effective length of query: 350
Effective length of database: 750
Effective search space: 262500
Effective search space used: 262500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no073_g06.g1 MSMg01no073_g06.g1 CHROMAT_FILE:
MSMg01no073_g06.g1 PHD_FILE: MSMg01no073_g06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:26 2005
(504 letters)
>mm_chr15_50499931_50500836
Length = 906
Score = 951 bits (492), Expect = 0.0
Identities = 502/506 (99%), Gaps = 2/506 (0%)
Strand = Plus / Minus
Query: 1 agttcttcttaataatgaaacatgaaaaccctaaaatttctgttactggatgattctcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 agttcttcttaataatgaaacatgaaaaccctaaaatttctgttactggatgattctcaa 647
Query: 61 gtaataaaataaaataagcaataaaagcagctgaaacaatttaggtta--ttttttcccc 118
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 646 gtaataaaataaaataagcaataaaagcagctgaaacaatttaggttattttttttcccc 587
Query: 119 ttgtgtcatatctggattaaccaacacacgtggcaaatctctgcatcgaaagacatgtag 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 ttgtgtcatatctggattaaccaacacacgtggcaaatctctgcatcgaaagacatgtag 527
Query: 179 ctaactgaggaagcacacccttgtctgagcaaagcttgactgggtattaatgacactcct 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ctaactgaggaagcacacccttgtctgagcaaagcttgactgggtattaatgacactcct 467
Query: 239 atagggctttgatgtgaacgtaaaggctaaagatgcttcgctttcttgaaatgctggttc 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 atagggctttgatgtgaacgtaaaggctaaagatgcttcgctttcttgaaatgctggttc 407
Query: 299 tagatgctgggttgtttcttctgtagaagtgaatagctgagaggactttatgtaggtttg 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 tagatgctgggttgtttcttctgtagaagtgaatagctgagaggactttatgtaggtttg 347
Query: 359 gggttagaggacaaccttctaccactgtagcatccagtaaaagccagcagaattagaaga 418
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 346 gggttagaggacaaccttctaccactgtagcatccagtaaaagccggcagaattagaaga 287
Query: 419 tccacttggtctgtgtcaacatcttctctgcctctgtttaagtacttagcgttagcattc 478
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 286 tccacttggtctgtgtcaacatcttctgtgcctctgtttaagtacttagcgttagcattc 227
Query: 479 ctttatccagggaggaaagattagtg 504
||||||||||||||||||||||||||
Sbjct: 226 ctttatccagggaggaaagattagtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 906
Length adjustment: 10
Effective length of query: 494
Effective length of database: 896
Effective search space: 442624
Effective search space used: 442624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
