Query= MSMg01no073_n19.b1 MSMg01no073_n19.b1 CHROMAT_FILE:
MSMg01no073_n19.b1 PHD_FILE: MSMg01no073_n19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:03 2005
(566 letters)
>mm_chr15_72500868_72501832
Length = 965
Score = 1025 bits (530), Expect = 0.0
Identities = 554/562 (98%), Gaps = 1/562 (0%)
Strand = Plus / Minus
Query: 5 gaattcactgcctccttgccattctgtaaggagtttgccatacagtgaaagatggcagac 64
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 gaattcactgcttccttgccattctgtaaggagtttgccatacagtgaaagatggcagac 706
Query: 65 cttggcatggtggggtcaggggtcctacctcaggggtagtctctgtttcctagtaccttg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 cttggcatggtggggtcaggggtcctacctcaggggtagtctctgtttcctagtaccttg 646
Query: 125 caaggcagaccctccaagaacatctgaggaaagcatagcctgcctcttaaccaaaagcca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 caaggcagaccctccaagaacatctgaggaaagcatagcctgcctcttaaccaaaagcca 586
Query: 185 ccaccccattcctggacacagtccagccagcttcctctaggcaacggtgctgttcgcagc 244
||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 585 ccatcccattcctggacacagtccagccagcttcctctaggcaaccgtgctgttcgcagc 526
Query: 245 ctaatgactctcaatctcctttgggcgccagctcagttaacagaagtcgttctgtgcagc 304
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 525 ctaatgactctcaatctcctttgggtgccagctcagttaacagaagtcgttctgtgcagc 466
Query: 305 caccacatacgcgctaaagatcatcaagtgtaaatgtttccaacaaagtccacgggaagt 364
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 465 caccacatacgcgctaaagatcatcaagtgt-aatgtttccaacaaagtccacgggaagt 407
Query: 365 cctttctcttcctgactaatttcctcaccgagcattcctgtttggttgcatggtactctg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 cctttctcttcctgactaatttcctcaccgagcattcctgtttggttgcatggtactctg 347
Query: 425 cagccttctcaagctgcgtccgtgtacccacatcgtccctctgcctaggctttctctgag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 cagccttctcaagctgcgtccgtgtacccacatcgtccctctgcctaggctttctctgag 287
Query: 485 ggaccagtagctagctgtgcacggcgggaccagagccctgcctcctaggaaagcagctac 544
||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 286 ggatcagtaactagctgtgcacggctggaccagagccctgcctcctaggaaagcagctac 227
Query: 545 tcatgtgtcactcttacatggt 566
||||||||||||||||||||||
Sbjct: 226 tcatgtgtcactcttacatggt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 965
Length adjustment: 10
Effective length of query: 556
Effective length of database: 955
Effective search space: 530980
Effective search space used: 530980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no073_n19.g1 MSMg01no073_n19.g1 CHROMAT_FILE:
MSMg01no073_n19.g1 PHD_FILE: MSMg01no073_n19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:04 2005
(384 letters)
>mm_chr15_72382493_72383276
Length = 784
Score = 634 bits (328), Expect = 0.0
Identities = 375/396 (94%), Gaps = 12/396 (3%)
Strand = Plus / Plus
Query: 1 atgccacatatggtgcctcaaaaaatttccttgtcccccaggctgtagtgtcatgtctga 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 atgccacatatggtgcctcaaaaaatttccttgtcccccaggctatagtgtcatgtctga 260
Query: 61 ggggcacttgcctattgctgtagttggagaagtcccagtgaaggccatggaaggccacta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggggcacttgcctattgctgtagttggagaagtcccagtgaaggccatggaaggccacta 320
Query: 121 ttattgtccctgattagtgaggagccaagatatctgaaattaatacaatggttggtactt 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttattgtccctggttagtgaggagccaagatatctgaaattaatacaatggttggtactt 380
Query: 181 gaggctatggcaggctgggaattgtgtcttcttcttcttcttcttcttcttcttcttctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaggctatggcaggctgggaattgtgtcttcttcttcttcttcttcttcttcttcttctt 440
Query: 241 cttcttcttcttcttcttcttcctcttcctcttcctcttcctcttcctcttc--ct-ctt 297
|||||||||||||||||||||| ||||| ||||| ||||| ||||| ||||| || |||
Sbjct: 441 cttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttctccttctt 500
Query: 298 ctt----tt-----tcatctcctccttctcctcctccatcatcagcatcatcatgcaggc 348
||| || ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttcctattcttcttcatcccctccttctcctcctccatcatcagcatcatcatgcaggc 560
Query: 349 acaggtcacaagggtgaggccatgttatgatgagaa 384
||||| ||||||||||||||||||||||||||||||
Sbjct: 561 acaggccacaagggtgaggccatgttatgatgagaa 596
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 78
Number of extensions: 29
Number of successful extensions: 29
Number of sequences better than 10.0: 1
Number of HSP's gapped: 24
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 784
Length adjustment: 9
Effective length of query: 375
Effective length of database: 775
Effective search space: 290625
Effective search space used: 290625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
