Query= MSMg01no076_p05.b1 MSMg01no076_p05.b1 CHROMAT_FILE:
MSMg01no076_p05.b1 PHD_FILE: MSMg01no076_p05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:07 2005
(573 letters)
>mm_chr15_50970758_50971734
Length = 977
Score = 1067 bits (552), Expect = 0.0
Identities = 567/574 (98%), Gaps = 6/574 (1%)
Strand = Plus / Minus
Query: 5 gaattccttactcttccgctttaagagagctcag----tttttttttcagttactttctt 60
|||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 777 gaattccttactcttcagctttaagagagctcagttattttttttttcagttactttctt 718
Query: 61 tgacattagtttactcataatatcaaaagaaaaaaattccctgcgggcatcatagttata 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 717 tgacattagtttactcataatatcaaaag-aaaaaattccctgcgggcatcatagttata 659
Query: 121 gtttactttaattacagaattcttcagcagtatactcaaaaactttctgaaatggatgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 gtttactttaattacagaattcttcagcagtatactcaaaaactttctgaaatggatgtt 599
Query: 181 tttggggtagattaaggtgacagctatagcactgggtaggactttgaagtgtttaaaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 tttggggtagattaaggtgacagctatagcactgggtaggactttgaagtgtttaaaaat 539
Query: 241 tcctccctacaagataagcctggagctgaatttcagccaagagtctgtaattgcctgaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 tcctccctacaagataagcctggagctgaatttcagccaagagtctgtaattgcctgaaa 479
Query: 301 gtgtgatctgttccatttgctccttcgcggttgcttccattttatccacggaggcagaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 gtgtgatctgttccatttgctccttcgcggttgcttccattttatccacggaggcagaac 419
Query: 361 tgtcttattcccagtctcatcttctctacaatgttgttctaccataaag-ttttttttaa 419
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 418 tgtcttattcccagtctcatcttctctacaatgttgttctaccataaagtttttttttaa 359
Query: 420 tagtgtatcttagagaagctggatataactggatgtgagccagtcaatcaatatttagtg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 tagtgtatcttagagaagctggatataactggatgtgagccagtcaatcaatatttagtg 299
Query: 480 accaatttgatatattagcaatactttcagagaaatgtgattgctacaagcttcggacct 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 accaatttgatatattagcaatactttcagagaaatgtgattgctacaagcttcggacct 239
Query: 540 tttcacaaaataactccccctgacaatatttgta 573
||||||||||||||||||||||||||||||||||
Sbjct: 238 tttcacaaaataactccccctgacaatatttgta 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 977
Length adjustment: 10
Effective length of query: 563
Effective length of database: 967
Effective search space: 544421
Effective search space used: 544421
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no076_p05.g1 MSMg01no076_p05.g1 CHROMAT_FILE:
MSMg01no076_p05.g1 PHD_FILE: MSMg01no076_p05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:07 2005
(332 letters)
>mm_chr15_50813708_50814441
Length = 734
Score = 584 bits (302), Expect = e-171
Identities = 324/332 (97%), Gaps = 2/332 (0%)
Strand = Plus / Plus
Query: 1 tcttcagttgattttgctctatgctgtaaaatgccataggaccaagctgagtttagtgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttcagttgattttgctctatgctgtaaaatgccataggaccaagctgagtttagtgtt 260
Query: 61 cttgttctggcttcttcccccccccc--ctttctttatggaatatgtagcttgcatggaa 118
|||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 261 cttgttctggcttcttcccccccccccactttttttatggaatatgtagcttgcatggaa 320
Query: 119 gttcttgaagttaaggaagatttacatttcctgggaagcaaggttaagggtgaggtagaa 178
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtcttgaagttaaggaagatttacatttcctgggaagcaaggttaagggtgaggtagaa 380
Query: 179 gatatcttctagaatccaaatgaaacaggtgcagtctgccctttgaaattaagaaatcta 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatatcttctagaatccaaatgaaacaggtgcagtctgccctttgaaattaagaaatcta 440
Query: 239 gcaacatcattctgcagccagttactaaagaaatagaagattgacttcattgtcacacac 298
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acaacatcattctgcaatcagttactaaagaaatagaagattgacttcattgtcacacac 500
Query: 299 aagggctccaaaagtaagagggggatcaggaa 330
||||||||||||||||||| ||||||||||||
Sbjct: 501 aagggctccaaaagtaagatggggatcaggaa 532
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 734
Length adjustment: 9
Effective length of query: 323
Effective length of database: 725
Effective search space: 234175
Effective search space used: 234175
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
