Query= MSMg01no079_e06.b1 MSMg01no079_e06.b1 CHROMAT_FILE:
MSMg01no079_e06.b1 PHD_FILE: MSMg01no079_e06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:51 2005
(622 letters)
>mm_chr15_58354834_58355855
Length = 1022
Score = 1036 bits (536), Expect = 0.0
Identities = 602/633 (95%), Gaps = 16/633 (2%)
Strand = Plus / Plus
Query: 5 gaattctttcacccctctggctagatgctgtcatggtttttcccagaatgttagtccaca 64
|||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttcacccatctggctagatgatgtcatggtttttcccagaatgttagtccaca 264
Query: 65 ctatggtccatggatgaaattttattttatttttttggaattttgtgaccctgaacagaa 124
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctatggtccatggatgacattttattttatttttttggaattttgtgaccctgaacagaa 324
Query: 125 gactctgagggtcacaggcaaccttaacctggcccttcagtcct-gggggcacagggaca 183
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 325 gactctgagggtcacaggcaaccttaacctggcccttcagtcctggggggtacagggaca 384
Query: 184 gatagaggccccacacaatgtcacttgtattgcagatccagaagagaggaggcagctaca 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tatagaggccccacacaatgtcacttgtattgcagatccagaagagaggaggcagctaca 444
Query: 244 gcctattggccggaatctgcttttctgtctcacacagctctgttaactgctttcactttc 303
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gcctattggccggaatctacttttctgtctcacacagctctgttaactgctttcactttc 504
Query: 304 ccatctctaatatcagcaactgtaggagagaaatgtaattctttctcacttattatttag 363
||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 505 ccatctctaatatcagcaactgtaggagagaaacgtaattctttctcactcattatttag 564
Query: 364 taagaagcttaatttttctgttgaagatattttttcgtgattatcaaagcaatttatggg 423
||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 565 taagacgcttaatttttctgttgaagatgttttt-cgtgattatcaaagcaatttatggg 623
Query: 424 ctttgctgaaaagttgttaacacatgagaaggagatgccagtggcaaattccataatctt 483
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cttcgctgaaaagttgttaacacatgagaaggagatgccagtggcaaattccataatctt 683
Query: 484 gtatcagcaactttattacacgaggcttctatttcctcacctaagtatgtgtgtgtgtgt 543
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gtatcagcaactttattacatgaggcttctatttcctcacctaagtatgtgtgtgtgtgt 743
Query: 544 gtgtg--------------catacgtgcgtgtgtgtaactgttttttattgcatattttc 589
||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 744 gtgtgtgtgtgtgtgtgtgcatacgtgcgtgtgtgtaactattttttattgcatattttc 803
Query: 590 ttaatttacatttcanatgttatcccctttccc 622
|| |||||||||||| |||||||||||||||||
Sbjct: 804 tttatttacatttcaaatgttatcccctttccc 836
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space: 619344
Effective search space used: 619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no079_e06.g1 MSMg01no079_e06.g1 CHROMAT_FILE:
MSMg01no079_e06.g1 PHD_FILE: MSMg01no079_e06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:51 2005
(587 letters)
>mm_chr15_58546325_58547311
Length = 987
Score = 1065 bits (551), Expect = 0.0
Identities = 581/597 (97%), Gaps = 10/597 (1%)
Strand = Plus / Minus
Query: 1 attagcatcatcacattcaccacggaggacgtgtgcggaatgctggtgtgtgctcatctc 60
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 646 attagcatcatcacattcaccacagaggacgtgtgtggaatgctggtgtgtgctcatctc 587
Query: 61 ctcacatatactgcacacctgttagtggctaggtctggaagagggtgggacagagcccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 ctcacatatactgcacacctgttagtggctaggtctggaagagggtgggacagagcccag 527
Query: 121 tgagattca----------gggaaagggtcagttactcacttgacaactcattagctgag 170
||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 tgagattcaggaaggacctgggaaagggtcagttactcacttgacaactcattagctgag 467
Query: 171 gcagatctagagaaaaatcagtgtaatacgggcagcagagagtggagcctttaataacta 230
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 466 gcagatctagagaaaaatcagtgtaatacgggcagcagagagtggagccttgaataacta 407
Query: 231 gtgtaaacaaaagactgtcagacttctggtgtcatgtagcacagagcagcaggtatcagc 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gtgtaaacaaaagactgtcagacttctggtgtcatgtagcacagagcagcaggtatcagc 347
Query: 291 cttagagccaaggggattggctatatcatccattgatgtatttctcttgggaaaggcagc 350
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 tttagagccaaggggattggctatatcatccattgatgtatttctcttgggaaaggcagc 287
Query: 351 ataacttctccatgcctcagttttccccatctgcaacacagaataatttgttatcaccaa 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ataacttctccatgcctcagttttccccatctgcaacacagaataatttgttatcaccaa 227
Query: 411 aaccttcaagtaaaaaataaatgagatgaaacatctaataacctgatatctaatggtgcc 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 aaccttcaagtaaaaaataaatgagatgaaacatctaataacctgatatctaatggtgcc 167
Query: 471 caaaatatgagaaaatattaatatagatcttagtgtttgcattttcttatatgtgttccc 530
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 166 caaaatatgagaaaatattaatatagatcttagtgtttacattttcttatatgtgttccc 107
Query: 531 tctttcaataaaagtattgttctgtggagttagactgcctaggaagcaggaagttct 587
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 106 tctttcaataaaagtattgttctgtggacttagactgcctaggaagcaggaagttct 50
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 987
Length adjustment: 10
Effective length of query: 577
Effective length of database: 977
Effective search space: 563729
Effective search space used: 563729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
