XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTT
TGTTTACCTCTGAGCCCCATTTTTTAATGGGGTTATTTGATTTTCTGGAG
TCCACCTTCTTGAGTTCTTTATATATATTGAATATTAGTCCCCTATCAGA
TTTAGGATTGGTAAAAATCCTTTCCCAATCTGTTGGTGGCCTTTTTGTCT
TATTGACGTTGTCTTTTGCCTTACAGAAGCACAATATCTTTCCACCAATC
CAGCCCTTCAAAGTATAATAAAGGGAAAACACCAACACAAGGATGGAAAC
TACACCCTAGAAAAAGCAAGAAATTCCTTCAACAAACCTAAAAGAAGACA
GCCTCAAGAACAGAATCCCAACTTTAACAACAAAAATAACAGGAAGCAAC
AATTACTTGTCTTTAATTTCTCTTAAGATCAATGGACTCAATTCCCCAAT
AAAAAGACATAGACTAATAAACTGGCTACACAAGGAGGACCTAACATTTT
GCTGCTTACAGGAAACCCACCGCAGGGAAAAAGCATGAGGGTATAAGTAA
GACAGAGAAAGGCAGCCACCAATGTTCCTCCATGGTACCTAAGTCCAGTT
TGCTGCCTGTGATATCCTGTCCTGACTTCCTTTAGTGATGCACTGTGACC
TAACAGCATAAGTTGAAAAATACATTTTTGTTTGTTCTTTGAGATGCTTT
TTGTCGGG

TGTGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXAATGTAAGAGCCAGCCACCTCATTACAATAGGGT
TTTCCAGACTTTTCGTTGTGTAAACTAAAAGTGTTCTCATTAGGAGTTTA
AAGGAATATATATTTTTTTTCTTTTCCCTAAGAGAACTCCTTTTTTTCCA
TCATGATTTTTACACACTTCTTTTATTTATTTACATCAGAAATGTTGTCC
CGCCCTCCTGTGTGTCACATATGTAGCAGAAGTCTGCCACGCCTAATAGA
ATTCTTCCACAAGTATCAGTATTCATTGATTCAGACTGATTTTCCTACAC
TTTTTAAGGCTGGTAACACATTTTGTTTGAAATCTCTTAGTATAATCATT
TAACATGCCCTTGGAAATAACACATGTTTATGAGTTCATTACAAGAATTT
CAGAAGCTGATTATTGAATTTAAAAGCTAATATAAAATGAGAAAATTCAT
TATTTGTCTTTTCTAATTAGACTGGGGTATGGTCACTACTATAACATAAC
AGTCACTACTATTCTTGAATATGCTTAGCAAAAGTTCCATCTCTTCTTTT
ATTCTTTTTGTAATGTTCTCACAAGTTCATCAGAGGTTAACTATACTTGT
CTCTAAAAGTTAGCAATACTAATATTAAGCTAAGTGTGCATGATATGGCA
CATGAAG

Query= MSMg01no079_k20.g1 MSMg01no079_k20.g1 CHROMAT_FILE:
MSMg01no079_k20.g1 PHD_FILE: MSMg01no079_k20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:22 2005
         (512 letters)



>mm_chr15_42305183_42306092
          Length = 910

 Score =  926 bits (479), Expect = 0.0
 Identities = 504/513 (98%), Gaps = 4/513 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aatgtaagagccagccacctcattacaatagggttttccagac-ttttcgttgtgtaaac 59
           ||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||
Sbjct: 710 aatgtaagagccagccacctcattataatagggttttccagacatttt-gttgtgtaaac 652

                                                                       
Query: 60  taaaagtgttctcattaggagtttaaaggaatatatattttttttcttttccctaagaga 119
           |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||
Sbjct: 651 taaaagtgttctcattaggagtttaaaggaatatata--ttttttcttttccctaagaga 594

                                                                       
Query: 120 actcctttttttccatcatgatttttacacacttcttttatttatttacatcagaaatgt 179
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 actcttttttttccatcatgatttttacacacttcttttatttatttacatcagaaatgt 534

                                                                       
Query: 180 tgtcccgccctcctgtgtgtcacatatgtagcagaagtctgccacgcctaatagaattct 239
           ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 533 tgtcctgccctcctgtgtgtcacatatgtagcagaagtctgacacgcctaatagaattct 474

                                                                       
Query: 240 tccacaagtatcagtattcattgattcagactgattttcctacactttttaaggctggta 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 tccacaagtatcagtattcattgattcagactgattttcctacactttttaaggctggta 414

                                                                       
Query: 300 acacattttgtttgaaatctcttagtataatcatttaacatgcccttggaaataacacat 359
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 413 acacattttgtttgaaatctcttagtataatcatttaacatggccttggaaataacacat 354

                                                                       
Query: 360 gtttatgagttcattacaagaatttcagaagctgattattgaatttaaaagctaatataa 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gtttatgagttcattacaagaatttcagaagctgattattgaatttaaaagctaatataa 294

                                                                       
Query: 420 aatgagaaaattcattatttgtcttttctaattagactggggtatggtcactactataac 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 aatgagaaaattcattatttgtcttttctaattagactggggtatggtcactactataac 234

                                            
Query: 480 ataacagtcactactattcttgaatatgcttag 512
           |||||||||||||||||||||||||||||||||
Sbjct: 233 ataacagtcactactattcttgaatatgcttag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 910
Length adjustment: 10
Effective length of query: 502
Effective length of database: 900
Effective search space:   451800
Effective search space used:   451800
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)