Query= MSMg01no080_a07.b1 MSMg01no080_a07.b1 CHROMAT_FILE:
MSMg01no080_a07.b1 PHD_FILE: MSMg01no080_a07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:48 2005
(328 letters)
>mm_chr15_41367855_41368583
Length = 729
Score = 584 bits (302), Expect = e-171
Identities = 320/326 (98%), Gaps = 3/326 (0%)
Strand = Plus / Plus
Query: 5 gaattctttttaacgcaaagaaatgaaactgttaagtatttaatataaagaaagaaaact 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttttaacgtaaagaaatgaaactgttaagtatttaatataaagaaagaaaact 264
Query: 65 atcagtatttaaggctctaagagaagtctggtcacttccaatttctttaagaactcattt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atcagtatttaaggctctaagagaagtctggtcacttccaatttctttaagaactcattt 324
Query: 125 cattttcttctgcaaacagaaatggcatcggagtcagaattttcttgctgaattgctata 184
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 325 cattttcttctgcaaacagaaatggcattggagtcagaattttcttgctgaattgctata 384
Query: 185 gctttgtgaattcatttttagataagtaagggatttatttggggcaaagggtgtaattat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gctttgtgaattcatttttagataagtaagggatttatttggggcaaagggtgtaattat 444
Query: 245 ttgtttaaatt-a-tggcagggttctgaagaacataattcttaatccacagaatgcgtcc 302
||||||||||| | || ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttgtttaaatttagtg-cagtgttctgaagaacataattcttaatccacagaatgcgtcc 503
Query: 303 ttggatccttaggcctcagtgctgag 328
||||||||||||||||||||||||||
Sbjct: 504 ttggatccttaggcctcagtgctgag 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 328
Length of database: 729
Length adjustment: 9
Effective length of query: 319
Effective length of database: 720
Effective search space: 229680
Effective search space used: 229680
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no080_a07.g1 MSMg01no080_a07.g1 CHROMAT_FILE:
MSMg01no080_a07.g1 PHD_FILE: MSMg01no080_a07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:48 2005
(412 letters)
>mm_chr15_41513326_41514138
Length = 813
Score = 775 bits (401), Expect = 0.0
Identities = 410/413 (99%), Gaps = 1/413 (0%)
Strand = Plus / Minus
Query: 1 tcctcactggtgttgc-aaataaataccaggactcaccaccagtcgtgctctagaaacag 59
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 tcctcactggtgttgcaaaataaataccaggactcaccaccagtcgtgctctagaaacag 413
Query: 60 acaaaaaggcacaaaggttcaattcccctctagaattacaggatcattagacttcctctt 119
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 412 acaaaaaggcacaaaggttcaattcccctctagaattacaggatcactagacttcctctt 353
Query: 120 ctgaggatcaaggactgtcagacagagaagaaagaatgtaaaagctggggtaaggggtga 179
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 ctgaggatcaagggctgtcagacagagaagaaagaatgtaaaagctggggtaaggggtga 293
Query: 180 agttaaggttaaaaccttctatcttagagagaaggtgattgagacataggatatttatag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 agttaaggttaaaaccttctatcttagagagaaggtgattgagacataggatatttatag 233
Query: 240 aaagtaaagcaacaggatgctctaaaaggatgtaaaacattccactcttcagagaaggtc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 aaagtaaagcaacaggatgctctaaaaggatgtaaaacattccactcttcagagaaggtc 173
Query: 300 catgagacagagagtaaacaactcaaatagcttcaggaagttcctaaaactgacaatatt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 catgagacagagagtaaacaactcaaatagcttcaggaagttcctaaaactgacaatatt 113
Query: 360 cactaggctcctcactccctcaatatatattcacacacacacacacacacaca 412
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 cactaggctcctcactccctcaatatatattcacacacacacacacacacaca 60
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 813
Length adjustment: 9
Effective length of query: 403
Effective length of database: 804
Effective search space: 324012
Effective search space used: 324012
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
