Query= MSMg01no081_k04.b1 MSMg01no081_k04.b1 CHROMAT_FILE:
MSMg01no081_k04.b1 PHD_FILE: MSMg01no081_k04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:30:54 2005
(439 letters)
>mm_chr15_22460198_22461037
Length = 840
Score = 810 bits (419), Expect = 0.0
Identities = 431/435 (99%), Gaps = 1/435 (0%)
Strand = Plus / Plus
Query: 6 gaattctctttgtcc-tattgtgtcttgtttcttttctgtactaggaatagaagaaaata 64
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattctctttgtcaatattgtgtcttgtttcttttctgtactaggaatagaagaaaata 265
Query: 65 aaggtttatttgcttaccttcaaaggtaatttgttaaaatcctgtatcttacattttcaa 124
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 266 aaggtttatttgcttaccttcaaaggtaatttgttaaaatcccgtatcttacattttcaa 325
Query: 125 tttagtagtgttagaatgtgaataaaacggatttttaatttttgaagtctaaattttaat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tttagtagtgttagaatgtgaataaaacggatttttaatttttgaagtctaaattttaat 385
Query: 185 taaatcctcaattattagattattttgtcacagagttactggatctggatttccaattta 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 taaatcctcaattattagattattttgtcacagagttactggatctggatttccaatttg 445
Query: 245 tgtatctattaattgtattgtctgacacagaagcattgtcctgtcacctttatcttctca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tgtatctattaattgtattgtctgacacagaagcattgtcctgtcacctttatcttctca 505
Query: 305 cttctaatgaagaccgtttcctttcctgtacaatctattccgatcatagtttcccctccc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 cttctaatgaagaccgtttcctttcctgtacaatctattccgatcatagtttcccctccc 565
Query: 365 tctactcctaccgttcctcaccacctcattctcattcagaccctcttcctttcagtctct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 tctactcctaccgttcctcaccacctcattctcattcagaccctcttcctttcagtctct 625
Query: 425 cattggtaaaagaag 439
|||||||||||||||
Sbjct: 626 cattggtaaaagaag 640
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 840
Length adjustment: 9
Effective length of query: 430
Effective length of database: 831
Effective search space: 357330
Effective search space used: 357330
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no081_k04.g1 MSMg01no081_k04.g1 CHROMAT_FILE:
MSMg01no081_k04.g1 PHD_FILE: MSMg01no081_k04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:30:54 2005
(474 letters)
>mm_chr15_22579712_22580586
Length = 875
Score = 775 bits (401), Expect = 0.0
Identities = 422/429 (98%), Gaps = 2/429 (0%)
Strand = Plus / Minus
Query: 48 gccgcattatcaggtcctgttgatttttaag-tttgacatatgtcacatttccccatgaa 106
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 875 gccgcattatcaggtcctgttgatttttaagctttgacatatgtcacatttccccatgaa 816
Query: 107 taaatacatacatgcatgtgtacacatgtgtgtgtctacctatttgtccatccatctatt 166
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 815 taaatacatacatgcatgtgtacacatgtgtgtgtctacctgtttgtccatccatctatt 756
Query: 167 tctctgtgtgtcttctctctctgtgtgtgtgtttgtgtgttgtgtatgtgtctgagtttc 226
|||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 755 tctctgtgtgtcttctctgtgtgtgtgtgtgtttgtgtgttgtgtatgtgtctgagtttc 696
Query: 227 tgtgtctgtgtgtctgtggtcattcaggttctagtcttagaaatccaatatattaatctt 286
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 tgtgtctgtgtgtctgtgggcattcaggttctagtcttagaaatccaatatattaatctt 636
Query: 287 gtaatctatgttttacagagtttaatgcaattt-aaaaaaatactaaatttgttctatga 345
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 635 gtaatctatgttttacagagtttaatgcaatttaaaaaaaatactaaatttgttctatga 576
Query: 346 caagctcatacaaatatataatgagaaatccaatttattgttcttgaaatatagagatat 405
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 575 caagctcatacaaatatataatgagaaatccaatttattgttcttgaaatatagagctat 516
Query: 406 tactgggatttacaatatttcagggtaatgtttttaaaaatattatatttgtttttcaac 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 tactgggatttacaatatttcagggtaatgtttttaaaaatattatatttgtttttcaac 456
Query: 466 aaatttaaa 474
|||||||||
Sbjct: 455 aaatttaaa 447
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 875
Length adjustment: 10
Effective length of query: 464
Effective length of database: 865
Effective search space: 401360
Effective search space used: 401360
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
