CTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCACAAGGCTATTAACATTGGCTGTCTGCTATTGATTAAAAGCAA
ACTCCAGCCAGCAATTGAACAAGAAGCCAGGAGGTCTGGGGCAAGACATT
AAGTAACCTTCAGTTGTCGTGCTGAGGGCATGTCCAGTGGAGGAGAGGGT
TCAGTTAGGCTCATAGGCTGATGAACTAGTGCAGCACAGGAGGGACCCTC
ATGTGGCATCCAGCTACACAGAAGAGGTCGATGCTGAGTGAGATTGATAA
TTAGTCTGAGGTTCCTGTGATTGCTAATATGTAATATTAGAAAAATGACC
AGTTTCCTATGTGAATAATGTGAGCATAGTTCTATTCTAATGTCTCATAG
AATAATTTCATCGAATTAAATACAGTGTTCAAATCAAGAGAAAATTTATT
TATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTA
TTTATTTATTTATTTATTACAAAGCAGGGTGTCTTCTGGTGATGTGCATA
AGACAGAAACTTGGCGCTGAATTTTCAGATTAGTCTGGCCAGATTTGGTT
TTTGTTTTGTTTTGTGTGTTTTGTTTTGTTTTGCTTTCACAAACTGTGAA
AATTTCTTTATTTCAATATTTCTTTATTTTCTTTAAATAAAAGTTGTA

TCCTTTTTTCTTTTTCCTTTTTTTCCTTAACTCCTCGTACGTATTCCCAC
GCTTTCTATCGTCCCAGTCTCTCCCAGCCAAGTTTTTCGCTCCGCCTCCT
ATCTTTTCTTTCATTTGGACTTTGCGCAATCAATTATTTATTTACCATGT
CCAAACCAAAATACTCGCAAATATAATCTCACCTTTTTTGCGCGTTCCCG
CGGTACCGGCTTTATCCTCAATATGACCCGGGTGCTTTTCCGGCTTTGCG
CCGTTTCACCCTTTTTTTCCCCGTATTTATTTTTCCCCCCACTTCCCTCA
CCCCTTTTGTTTTACCGTTGATAGCCCGCTGTATGAATAGTGTGAATGCA
GAGTCCGCGCGTTATTTTATTCCGCTTAATCCTCGCCGCGCTTATTTTCC
TGCAGACGTGTTATTTACCCGCAGCAGACATCCCATAGAGTGGCTGTAAG
AAACAAAAGCGGGAACAAAAGGGGGAAAAATTCGCGCTTTAGCTAGTATC
GGGTTTTACATAAATTCCCGTTCCGCGTAGGGGTTGAGGAAAATCGGGAA
ATCTGATAATAACCCGAACCGGCCGAAAACGAAATAATTGGGGCGGATAA
CCAATCGCGACGTAATTTTGTCATAAAGGACCGTAAGTCCTGAAGCGGGA
TGGAGGAGAAAAGAGGGAAGGTGTGACGCCGGGTAAAACGAAAAGTGTTA
CAGACACGGTCGGAGCAACTTGCATCGTCGGGAAGATGATATGATGAAAT
TTTATTTTTTAATTAGATTGGGGAGGCGATTACACAAAAGAGGGTGAAAT
TAGTGGGAAGGGGTGGGGGGGTGATTAGCTTCCGTCTTGTACAAATAATA
AAAAGTGCGGCTGTGGCTCATAATATAAATATATTGTATAAATATATAGA
GGTGAATAAAAATAAGTGCATAAAATACGGCCGAAAACGCGGCAACTAAT
CATTGGCTATTCGGGTATGAATATATGGACGAGACAAGCGCGTGTTTGTG
ATTAAAATAGGAGTGGTGATGATGCGGTGTAAAACAATCTATATATAATG
TTTTGTCTCACAATATATTTTCGCCCTCCGCGCGTATAAATCACAGCTTT
AATTANTCGCAATTGGTACGCACGCCTTTTTAATATGGAGGCTATGTTCT
GCTCGGTGTATTAAN

Query= MSMg01no088_d02.b1 MSMg01no088_d02.b1 CHROMAT_FILE:
MSMg01no088_d02.b1 PHD_FILE: MSMg01no088_d02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:35 2005
         (643 letters)



>mm_chr15_29004018_29005060
          Length = 1043

 Score = 1035 bits (535), Expect = 0.0
 Identities = 592/639 (92%), Gaps = 44/639 (6%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcacaaggctattaacattggctgtctgctattgattaaaagcaaactccagccag 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 gaattcacaaggctattaacattggctgtctgctattgattaaaagcaaactccagccag 537

                                                                       
Query: 65  caattgaacaagaagccaggaggtctggggcaagacattaagtaaccttcagttgtcgtg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 caattgaacaagaagccaggaggtctggggcaagacattaagtaaccttcagttgtcgtg 477

                                                                       
Query: 125 ctgagggcatgtccagtggaggagagggttcagttaggctcataggctgatgaactagtg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 ctgagggcatgtccagtggaggagagggttcagttaggctcataggctgatgaactagtg 417

                                                                       
Query: 185 cagcacaggagggaccctcatgtggcatccagctacacagaagaggtcgatgctgagtga 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 cagcacaggagggaccctcatgtggcatccagctacacagaagaggtcgatgctgagtga 357

                                                                       
Query: 245 gattgataattagtctgaggttcctgtgattgctaatatgtaatattagaaaaatgacca 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 gattgataattagtctgaggttcctgtgattgctaatatgtaatattagaaaaatgacca 297

                                                                       
Query: 305 gtttcctatgtgaataatgtgagcatagttctattctaatgtctcatagaataatttcat 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gtttcctatgtgaataatgtgagcatagttctattctaatgtctcatagaataatttcat 237

                                                                       
Query: 365 cgaattaaatacagtgttcaaatcaagagaaaatttatttatttatttatttatttattt 424
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| 
Sbjct: 236 cgaattaaatacagtgttcaaatcaagagaaaatttatttatttatttatatatttatt- 178

                                                                       
Query: 425 atttatttatttatttatttatttatttatttatttatttatttattacaaagcagggtg 484
           |                                           ||||||||||||||||
Sbjct: 177 a-------------------------------------------attacaaagcagggtg 161

                                                                       
Query: 485 tcttctggtgatgtgcataagacagaaacttggcgctgaattttcagattagtctggcca 544
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 160 tcttctggtgatgtgcataagacagaaacttggccctgaattttcagattagtctggcca 101

                                                                       
Query: 545 gatttggtttttgttttgttttgtgtgttttgttttgttttgctttcacaaactgtgaaa 604
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 100 gatttggtttttgttttgttttgtgtgttttgttttgttttgttttcacaaactgtgaaa 41

                                                  
Query: 605 atttctttatttcaatatttctttattttctttaaataa 643
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 40  atttctttatttcaatatttctttattttctttaaataa 2


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 74
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1043
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1033
Effective search space:   653889
Effective search space used:   653889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)