Query= MSMg01no088_i02.b1 MSMg01no088_i02.b1 CHROMAT_FILE:
MSMg01no088_i02.b1 PHD_FILE: MSMg01no088_i02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:00 2005
(311 letters)
>mm_chr15_86046503_86047213
Length = 711
Score = 536 bits (277), Expect = e-157
Identities = 299/311 (96%), Gaps = 8/311 (2%)
Strand = Plus / Plus
Query: 1 taaatactgtctcttgatagtgcattttttattttttattttttattttttggacctagg 60
|||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 209 taaatactgtctcttgatagtgcattttttattttttatttttt--------gagctagg 260
Query: 61 gtctcatttatagtgcaggctggccttgagcttctgaccctcctgcctcattctcccgag 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 261 gtctcatttatagtgcaggctggccctgagcttctgaccctcctgcctcattctcccgag 320
Query: 121 tatacaagtgactatacctggtgtggtagtttgtcttcatactgggctagacagtaacat 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatacaagtcactatacctggtgtggtagtttgtcttcatactgggctagacagtaacat 380
Query: 181 tcctaatattttactgtgactgtgaccgtgaccttgcttggaagcaggatctctgtagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcctaatattttactgtgactgtgaccgtgaccttgcttggaagcaggatctctgtagac 440
Query: 241 attactgagtaatggggaggccctcattcagtctctggttcccgtaagaacatggaactt 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attactgagcaatggggaggccctcattcagtctctggttcccgtaagaacatggaactt 500
Query: 301 catatacagag 311
|||||||||||
Sbjct: 501 catatacagag 511
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 711
Length adjustment: 9
Effective length of query: 302
Effective length of database: 702
Effective search space: 212004
Effective search space used: 212004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no088_i02.g1 MSMg01no088_i02.g1 CHROMAT_FILE:
MSMg01no088_i02.g1 PHD_FILE: MSMg01no088_i02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:00 2005
(218 letters)
>mm_chr15_86212057_86212674
Length = 618
Score = 420 bits (217), Expect = e-122
Identities = 217/217 (100%)
Strand = Plus / Minus
Query: 1 agttctgagtattttgaaactatcggtgcacgtattaatacctggtagtaagagcgggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 agttctgagtattttgaaactatcggtgcacgtattaatacctggtagtaagagcgggtg 358
Query: 61 actgacttttgctcttataaaattttgtaaaatgttttatgtattaaatatgaaggtttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 actgacttttgctcttataaaattttgtaaaatgttttatgtattaaatatgaaggtttc 298
Query: 121 tatagcatatatgtaaatacatatacaattatactgaataaaaattatattcttcattct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 tatagcatatatgtaaatacatatacaattatactgaataaaaattatattcttcattct 238
Query: 181 gaactctgactttggacagtgactttcactttgttta 217
|||||||||||||||||||||||||||||||||||||
Sbjct: 237 gaactctgactttggacagtgactttcactttgttta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 218
Length of database: 618
Length adjustment: 9
Effective length of query: 209
Effective length of database: 609
Effective search space: 127281
Effective search space used: 127281
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
