Query= MSMg01no090_a21.b1 MSMg01no090_a21.b1 CHROMAT_FILE:
MSMg01no090_a21.b1 PHD_FILE: MSMg01no090_a21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:43:05 2005
(487 letters)
>mm_chr15_85691806_85692690
Length = 885
Score = 806 bits (417), Expect = 0.0
Identities = 466/483 (96%), Gaps = 4/483 (0%)
Strand = Plus / Plus
Query: 5 gaattccaggctatctcaagtagttgatctttagaagctagcctgtgcctgaaggtgact 64
||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 205 gaattccaggctagctaaagtagttgatctttagaaaatagcctgtgcctgaaggtgact 264
Query: 65 tagccttcttggaaaccctagattctatcacagaggtaagggtctgtgttttgatggtgg 124
|||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct: 265 tagccttcttggaaaccctagattctatcatagaggtaaggttctgtgttttgatggtgg 324
Query: 125 atcagtgcactcagagtggctcctggaacttgagagtagaaatgggaaataagaaggact 184
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 325 atcagtgcactcagagtggctcctggaacttgagagtggaaatgggaaataagaaggact 384
Query: 185 tgaggtgcccatgacaattgattgaattcaggcaacaatctattactttactgagagatt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgaggtgcccatgacaattgattgaattcaggcaacaatctattactttactgagagatt 444
Query: 245 catagcagctgtgaaaccagtgctttcctgttttatgttaccctaaaataacagtgaact 304
||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 445 catagcaactgtgaaaccagtgctttcctgttttatgttaccctaaaataac--tgaact 502
Query: 305 ttttctccccatccccaccccagactttcttcttttggaagatgaaaaatttgacttcga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ttttctccccatccccaccccagactttcttcttttggaagatgaaaaatttgacttcga 562
Query: 365 tctttccttgtcttcttcaaggtaaccatgccgttttcttccctaacccctggcatagac 424
||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||
Sbjct: 563 tctttccttgtcttcttcaaggtaaacatgc-gttttcttccctaacccctggtatagac 621
Query: 425 aggttcatccaagcccctcacctagatgctggtgtgatt-cagccctgatcatctttttc 483
||||||||| ||||||||| ||||||||||||||||||| |||||||||| |||||||||
Sbjct: 622 aggttcatcaaagcccctcgcctagatgctggtgtgatttcagccctgataatctttttc 681
Query: 484 ttt 486
|||
Sbjct: 682 ttt 684
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 885
Length adjustment: 10
Effective length of query: 477
Effective length of database: 875
Effective search space: 417375
Effective search space used: 417375
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no090_a21.g1 MSMg01no090_a21.g1 CHROMAT_FILE:
MSMg01no090_a21.g1 PHD_FILE: MSMg01no090_a21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:43:05 2005
(288 letters)
>mm_chr15_85786306_85786993
Length = 688
Score = 505 bits (261), Expect = e-147
Identities = 270/273 (98%)
Strand = Plus / Minus
Query: 5 tcctgtgagctagctcagaggagcaccccattacagaaggctacctcaaatggcccagaa 64
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 tcctgtgagccagctcagaggagcaccccattacagaaggctacctcaaatggcccagaa 418
Query: 65 gaaagaggggccccgtgccagaggatcagtaggtaaacgtgggttactggaatctgtggt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gaaagaggggccccgtgccagaggatcagtaggtaaacgtgggttactggaatctgtggt 358
Query: 125 tccctttctaggctgggtcctttcaacagctccctccacctcccagtgaacaaacacagc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tccctttctaggctgggtcctttcaacagctccctccacctcccagtgaacaaacacagc 298
Query: 185 cccgagcacaggattaggcctttgctaggctgtttccttctcttgccagagggtgggtat 244
|| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 297 ccggagcacaggattaggcctttgctgggctgtttccttctcttgccagagggtgggtat 238
Query: 245 tttagggaagaaaccaaccagtctcccttatgg 277
|||||||||||||||||||||||||||||||||
Sbjct: 237 tttagggaagaaaccaaccagtctcccttatgg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
