Query= MSMg01no090_h20.b1 MSMg01no090_h20.b1 CHROMAT_FILE:
MSMg01no090_h20.b1 PHD_FILE: MSMg01no090_h20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:43:40 2005
(280 letters)
>mm_chr15_76160155_76160836
Length = 682
Score = 441 bits (228), Expect = e-128
Identities = 262/276 (94%), Gaps = 7/276 (2%)
Strand = Plus / Plus
Query: 7 gaattcagactttcttc-cccttaagcttggacctcagactcctcc-acacaccagattt 64
||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 207 gaattcagactttcttcacccttaagcttggacctcagactcctccaacacaccagattt 266
Query: 65 gtgctgagagtcctgcccctcaattaggcagggtttttatactagtttgagcagggagca 124
|||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 267 gtgctgagagccctgagcctcaattaggcagggtttttatactagtttgatcagggagca 326
Query: 125 ggggtctccagcctgtcagttgccttattttgcaaagttatctttttttttttttttttc 184
||||||||| |||||||||||||||||||| ||||||||||| ||||||||||| |
Sbjct: 327 ggggtctcctgcctgtcagttgccttatttcgcaaagttatc-----tttttttttttcc 381
Query: 185 tgtttttttgagacagggtttctctgtgtagccctggctgtcctggaactcactctgtag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tgtttttttgagacagggtttctctgtgtagccctggctgtcctggaactcactctgtag 441
Query: 245 accaggcctgcctctgcctcctgagtgctgggatta 280
||||||||||||||||||||||||||||||||||||
Sbjct: 442 accaggcctgcctctgcctcctgagtgctgggatta 477
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 682
Length adjustment: 9
Effective length of query: 271
Effective length of database: 673
Effective search space: 182383
Effective search space used: 182383
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no090_h20.g1 MSMg01no090_h20.g1 CHROMAT_FILE:
MSMg01no090_h20.g1 PHD_FILE: MSMg01no090_h20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:43:40 2005
(252 letters)
>mm_chr15_76309252_76309903
Length = 652
Score = 462 bits (239), Expect = e-135
Identities = 248/251 (98%)
Strand = Plus / Minus
Query: 1 ctacctgtgaacagacagccagatccaagaagctctgctgtccctggatcgcctagacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 451 ctacctgtgaacagacagccagatccaagaagctctgctgtccctggatggcctagacaa 392
Query: 61 gggttttcttttttctacttctacgtcagagcttgttttttgtactcagggtcatgccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 gggttttcttttttctacttctacgtcagagcttgttttttgtactcagggtcatgccag 332
Query: 121 ctcccactgaccaccgtctcttataccagctccactgcttacagcgtgtcttatagcagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 ctcccactgaccaccgtctcttataccagctccactgcttacagcgtgtcttatagcagt 272
Query: 181 ccactgctgctcggtacagactacttgcccatgcctcccagcacgctaacaaggctcaca 240
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 271 ccactgctgctcagtacagactacttgcccatgactcccagcacgctaacaaggctcaca 212
Query: 241 gatgagttgca 251
|||||||||||
Sbjct: 211 gatgagttgca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 252
Length of database: 652
Length adjustment: 9
Effective length of query: 243
Effective length of database: 643
Effective search space: 156249
Effective search space used: 156249
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
