Query= MSMg01no090_h22.b1 MSMg01no090_h22.b1 CHROMAT_FILE:
MSMg01no090_h22.b1 PHD_FILE: MSMg01no090_h22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:43:40 2005
(278 letters)
>mm_chr15_76160158_76160837
Length = 680
Score = 456 bits (236), Expect = e-133
Identities = 264/276 (95%), Gaps = 7/276 (2%)
Strand = Plus / Plus
Query: 4 gaattcagactttcttctcc-ttaagcttggacctcagactcctcca-cacaccagattt 61
||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||
Sbjct: 204 gaattcagactttcttcacccttaagcttggacctcagactcctccaacacaccagattt 263
Query: 62 gtgctgagagccctgagcctcaattaggcagggtttttatactagtttgagcagggagca 121
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 264 gtgctgagagccctgagcctcaattaggcagggtttttatactagtttgatcagggagca 323
Query: 122 ggggtctccagcctgtcagttgccttattttgcaaagttatctttttttttttttttttc 181
||||||||| |||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 324 ggggtctcctgcctgtcagttgccttatttcgcaaagttatctttttttttttc-----c 378
Query: 182 tgtttttttgagacagggtttctctgtgtagccctggctgtcctggaactcactctgtag 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tgtttttttgagacagggtttctctgtgtagccctggctgtcctggaactcactctgtag 438
Query: 242 accaggcctgcctctgcctcctgagtgctgggatta 277
||||||||||||||||||||||||||||||||||||
Sbjct: 439 accaggcctgcctctgcctcctgagtgctgggatta 474
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 278
Length of database: 680
Length adjustment: 9
Effective length of query: 269
Effective length of database: 671
Effective search space: 180499
Effective search space used: 180499
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no090_h22.g1 MSMg01no090_h22.g1 CHROMAT_FILE:
MSMg01no090_h22.g1 PHD_FILE: MSMg01no090_h22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:43:40 2005
(293 letters)
>mm_chr15_76309212_76309904
Length = 693
Score = 540 bits (279), Expect = e-158
Identities = 288/291 (98%)
Strand = Plus / Minus
Query: 1 ctacctgtgaacagacagccagatccaagaagctctgctgtccctggatggcctagacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ctacctgtgaacagacagccagatccaagaagctctgctgtccctggatggcctagacaa 432
Query: 61 gggttttcttttttctacttctacgtcagagcttgttttttgtactcagggtcatgccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gggttttcttttttctacttctacgtcagagcttgttttttgtactcagggtcatgccag 372
Query: 121 ctcccactgaccaccgtctcttataccagctccactgcttacagcgtgtcttatagcagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ctcccactgaccaccgtctcttataccagctccactgcttacagcgtgtcttatagcagt 312
Query: 181 ccactgctgctcggtacagactacttgcccatgcctcccagcacgctaacaaggctcaca 240
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 311 ccactgctgctcagtacagactacttgcccatgactcccagcacgctaacaaggctcaca 252
Query: 241 gatgagttgcatctgtgtggatggaaggaggtgacagggcagatcagctcc 291
||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gatgagttgcagctgtgtggatggaaggaggtgacagggcagatcagctcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
