Query= MSMg01no090_l11.b1 MSMg01no090_l11.b1 CHROMAT_FILE:
MSMg01no090_l11.b1 PHD_FILE: MSMg01no090_l11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:43:58 2005
(249 letters)
>mm_chr15_73812388_73813030
Length = 643
Score = 455 bits (235), Expect = e-132
Identities = 243/249 (97%), Gaps = 6/249 (2%)
Strand = Plus / Minus
Query: 1 aacacttaaaataataatgaagcccggggttgctgcaactcccggctggctctgcggcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aacacttaaaataataatgaagcccggggttgctgcaactcccggctggctctgcggcca 384
Query: 61 ggctgccttgccgccatgatcaatcttcattttcacaccgggtgccagacagctctgcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ggctgccttgccgccatgatcaatcttcattttcacaccgggtgccagacagctctgcag 324
Query: 121 ggtggggctggccggaagccctggggaattcacaggccaccaggatgcccgggcactcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ggtggggctggccggaagccctggggaattcacaggccaccaggatgcccgggcactcac 264
Query: 181 ctgctactctgagcagcgggagagagactcccaggccatgctgaacctaacctccctcac 240
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 263 ctgctactctgagcagcgggagagag------aggccatgctgaacctaacctccctcac 210
Query: 241 acaccaagt 249
|||||||||
Sbjct: 209 acaccaagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 643
Length adjustment: 9
Effective length of query: 240
Effective length of database: 634
Effective search space: 152160
Effective search space used: 152160
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no090_l11.g1 MSMg01no090_l11.g1 CHROMAT_FILE:
MSMg01no090_l11.g1 PHD_FILE: MSMg01no090_l11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:43:58 2005
(231 letters)
>mm_chr15_73792349_73792979
Length = 631
Score = 439 bits (227), Expect = e-128
Identities = 230/231 (99%)
Strand = Plus / Plus
Query: 1 tctttggtatgattgccacttttaaattcacgtatcccaaagtaaaagactgactgtttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctttggtatgattgccacttttaaattcacgtatcccaaagtaaaagactgactgtttt 260
Query: 61 ggtgaggctcagagagaggcagcagagggaagtatatggtgggggaggttggagagaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtgaggctcagagagaggcagcagagggaagtatatggtgggggaggttggagagaaca 320
Query: 121 agagactagacaggaggaagtgaagatgtaggggggcaggcctcctccatagctgactca 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agagattagacaggaggaagtgaagatgtaggggggcaggcctcctccatagctgactca 380
Query: 181 tgaggtggggagtctgccccaggttgagagggatgctgtgtagccagggtg 231
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaggtggggagtctgccccaggttgagagggatgctgtgtagccagggtg 431
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 231
Length of database: 631
Length adjustment: 9
Effective length of query: 222
Effective length of database: 622
Effective search space: 138084
Effective search space used: 138084
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
