Query= MSMg01no093_o05.b1 MSMg01no093_o05.b1 CHROMAT_FILE:
MSMg01no093_o05.b1 PHD_FILE: MSMg01no093_o05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:49:10 2005
(193 letters)
>mm_chr15_23623414_23624006
Length = 593
Score = 344 bits (178), Expect = 2e-99
Identities = 189/193 (97%)
Strand = Plus / Plus
Query: 1 taatggtgattgctcgcggnacacaaggctctcctcagagattaccggctctccacagtg 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taatggtgattgctcgcggcacacaaggctctcctcagagattaccggctctccacagtg 260
Query: 61 tcaaacccagatgacattaccaggaattgtaattttattctaactgccatttggaggcat 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcaaaaatagatgacattaccaggaattgtaattttattctaactgccatttggaggcat 320
Query: 121 atttctattaattcataaccaagtgtttacttttatgatagttaatattgtccttcatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atttctattaattcataaccaagtgtttacttttatgatagttaatattgtccttcatgt 380
Query: 181 aagatcaagcatc 193
|||||||||||||
Sbjct: 381 aagatcaagcatc 393
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 193
Length of database: 593
Length adjustment: 8
Effective length of query: 185
Effective length of database: 585
Effective search space: 108225
Effective search space used: 108225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no093_o05.g1 MSMg01no093_o05.g1 CHROMAT_FILE:
MSMg01no093_o05.g1 PHD_FILE: MSMg01no093_o05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:49:10 2005
(330 letters)
>mm_chr15_23697121_23697854
Length = 734
Score = 592 bits (306), Expect = e-173
Identities = 323/332 (97%), Gaps = 8/332 (2%)
Strand = Plus / Minus
Query: 5 attgattgttccattctccttatcaaatataagtaatcct--tttgctatttttaagcac 62
||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 534 attgattgttccattctccttatcaaatataagtaat--taatttgctatttttaagcac 477
Query: 63 ttgtgaactgttgagctcaatatgctacctgtgttgtattggaaagtgttttcattgctc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 ttgtgaactgttgagctcaatatgctacctgtgttgtattggaaagtgttttcattgctc 417
Query: 123 acacaatacaaagccactcctaactataatttaatgcacctggcatggaatgttttatat 182
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 acacaatacaaagccactcgtaactataatttaatgcacctggcatggaatgttttatat 357
Query: 183 tgaaccctgtttaattttccctagtcatataaaatatattaggtagggtttgacttatat 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 tgaaccctgtttaattttccctagtcatataaaatatattaggtagggtttgacttatat 297
Query: 243 actgctaaaaagatagtactttgcaaagtaaaat----acacacacacacaaagatgttt 298
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 296 actgctaaaaagatagtactttgcaaagtaaaatacacacacacacacacaaagatgttt 237
Query: 299 caatgtttcaacttgggtagttaatgtacaat 330
||||||||||||||||||||||||||||||||
Sbjct: 236 caatgtttcaacttgggtagttaatgtacaat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 734
Length adjustment: 9
Effective length of query: 321
Effective length of database: 725
Effective search space: 232725
Effective search space used: 232725
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
