Query= MSMg01no096_c16.b1 MSMg01no096_c16.b1 CHROMAT_FILE:
MSMg01no096_c16.b1 PHD_FILE: MSMg01no096_c16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:25 2005
(251 letters)
>mm_chr15_25494794_25495444
Length = 651
Score = 391 bits (202), Expect = e-113
Identities = 243/268 (90%), Gaps = 18/268 (6%)
Strand = Plus / Plus
Query: 1 cttgaagccacttcattggcctggcctttttggctgactgtagccaacacacattcctag 60
||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||
Sbjct: 183 cttgaagccacttcattggcctggcctttttggttgactgtagccaacagaaattcctag 242
Query: 61 tcatccgggccccaaagactgtatacgtctacgatggaaagaaccatcccgtattttcag 120
|||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tcatccaggcccccaagaccgtatacgtctacgatggaaagaaccatcccgtattttcag 302
Query: 121 ttcctta------------------agaaactgagaaatatttgaccccgtgccctgatt 162
||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 303 ttccttaggagaaaaacaacgaataagaaactgagaaatatttgaccccgtgccctgatt 362
Query: 163 atcctacaaagcaaacagttgctcaggcatggcacaagcgcctctcgagagaatccatcc 222
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 363 atcctacaaagcaaacagttgctcaggcatggcacaagcgcctctcgagagaatacatcc 422
Query: 223 tccaggcctcctgtctcccttgtcttac 250
||||||||||||||||||||||||||||
Sbjct: 423 tccaggcctcctgtctcccttgtcttac 450
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space: 155364
Effective search space used: 155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no096_c16.g1 MSMg01no096_c16.g1 CHROMAT_FILE:
MSMg01no096_c16.g1 PHD_FILE: MSMg01no096_c16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:25 2005
(208 letters)
>mm_chr15_25622837_25623444
Length = 608
Score = 383 bits (198), Expect = e-111
Identities = 204/206 (99%)
Strand = Plus / Minus
Query: 1 tcttcccacaatgtccccatggactggctcttccccatggcatctatggagagatctgaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 406 tcttcccacaatgtccccatggactggctcttccccatggcatctatggagagatctgga 347
Query: 61 cccctgaaagggggaagagaaggcagtagggggctggggtgatgttaggataaaggccat 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 cccctgaaaaggggaagagaaggcagtagggggctggggtgatgttaggataaaggccat 287
Query: 121 taaagtgaagttctcctaaaaacagcagcgttgttaataacctaagagaaggtgaacagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 taaagtgaagttctcctaaaaacagcagcgttgttaataacctaagagaaggtgaacagg 227
Query: 181 gcatgcttgtgtgtgtgtttaactca 206
||||||||||||||||||||||||||
Sbjct: 226 gcatgcttgtgtgtgtgtttaactca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 208
Length of database: 608
Length adjustment: 9
Effective length of query: 199
Effective length of database: 599
Effective search space: 119201
Effective search space used: 119201
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
