Query= MSMg01no103_d17.b1 MSMg01no103_d17.b1 CHROMAT_FILE:
MSMg01no103_d17.b1 PHD_FILE: MSMg01no103_d17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:02:05 2005
(599 letters)
>mm_chr15_63276234_63277231
Length = 998
Score = 1112 bits (575), Expect = 0.0
Identities = 590/595 (99%), Gaps = 1/595 (0%)
Strand = Plus / Plus
Query: 5 gaattctcaaatgtgcagcttagtaaccctattaggactatggaagggagaaaagctgct 64
||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 205 gaattctcaaatgagaagcttagtaaccctattaggactatgaaagggagaaaagctgct 264
Query: 65 agggtctggggagaacatatgcctgaaataaaagtgtctagaaagcttgctgcagttgca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agggtctggggagaacatatgcctgaaataaaagtgtctagaaagcttgctgcagttgca 324
Query: 125 ccaaggaaatctatttcatatccttctcttgattagcattctaatggtttctgactcagg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ccaaggaaatctatttcatatccttctcttgattagcattctaatggtttctgactcagg 384
Query: 185 tctaacagcttggagggaatattctaggcaattgtgtaaataatacaggtttttttttct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 385 tctaacagcttggagggaatattctaggcaattgtgtaaataatacaggtttttttt-ct 443
Query: 245 gtgtgcccaaatgtataattaaatggataatgttacagacccccaaacccactaaggcct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gtgtgcccaaatgtataattaaatggataatgttacagacccccaaacccactaaggcct 503
Query: 305 gctgtctaaatggagagcttttgaaatttcatccaatacatggttacatgatacattgct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gctgtctaaatggagagcttttgaaatttcatccaatacatggttacatgatacattgct 563
Query: 365 tttatggcccgctgggcaaatgactagtggtttggaaaaggtctgaaggcatatttatag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tttatggcccgctgggcaaatgactagtggtttggaaaaggtctgaaggcatatttatag 623
Query: 425 tagagcactcaatgatgtttggagggccggtaaaattgcactagtaaataacgtgaatta 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tagagcactcaatgatgtttggagggccggtaaaattgcactagtaaataacgtgaatta 683
Query: 485 tacagaaccagctcttaatgtatatgaatttctcagctgcaggatgtgtgtcgacacaaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tacagaaccagctcttaatgtatatgaatttctcagctgcaggatgtgtgtcgacacaaa 743
Query: 545 cacacgtcatctccttgatatatttaggcattgtggttcaaattctatatgatca 599
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 cacatgtcatctccttgatatatttaggcattgtggttcaaattctatatgatca 798
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 998
Length adjustment: 10
Effective length of query: 589
Effective length of database: 988
Effective search space: 581932
Effective search space used: 581932
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no103_d17.g1 MSMg01no103_d17.g1 CHROMAT_FILE:
MSMg01no103_d17.g1 PHD_FILE: MSMg01no103_d17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:02:05 2005
(625 letters)
>mm_chr15_63346984_63348008
Length = 1025
Score = 770 bits (398), Expect = 0.0
Identities = 410/414 (99%)
Strand = Plus / Minus
Query: 1 agaaatttctgattcctttgggatgagaaaagcatcttggacagggtgatggaaatagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 agaaatttctgattcctttgggatgagaaaagcatcttggacagggtgatggaaatagat 555
Query: 61 gttactgagtaactttcaaagctgctagtcatggcagaaatagcattcctttgttgttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gttactgagtaactttcaaagctgctagtcatggcagaaatagcattcctttgttgttat 495
Query: 121 tttcagaagtatgaaaaaaagtggatttccaaatcctcatcaaacgaatcatcacaataa 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 494 tttcagaagtatgaaaaaaagtggatttctaaatcctcatcaaacgaatcatcacaataa 435
Query: 181 ttcacctatcctcccctactggtaaagcgatggttgttcatccattctgtgcctgatccc 240
||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 434 ttcacctatcctcccctactggtaaagcgatggttgttcattcattctatgcctgatccc 375
Query: 241 agatgtgtccatctcagaagcatcatagatagcatcatgtccacagtcagtgtacataca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 agatgtgtccatctcagaagcatcatagatagcatcatgtccacagtcagtgtacataca 315
Query: 301 aaatctacacaaattttagaaaaggtcaggtatgaataggaatgataataggtctttctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 aaatctacacaaattttagaaaaggtcaggtatgaataggaatgataataggtctttctt 255
Query: 361 ggaagggtgagtggtgttggaatactatttttcaaagatgggatatatcagtgt 414
|||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ggaaggttgagtggtgttggaatactatttttcaaagatgggatatatcagtgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space: 624225
Effective search space used: 624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
