Query= MSMg01no103_g11.b1 MSMg01no103_g11.b1 CHROMAT_FILE:
MSMg01no103_g11.b1 PHD_FILE: MSMg01no103_g11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:02:19 2005
(568 letters)
>mm_chr15_40789979_40790946
Length = 968
Score = 1038 bits (537), Expect = 0.0
Identities = 558/565 (98%), Gaps = 1/565 (0%)
Strand = Plus / Plus
Query: 5 gaattctgtgtca-taccattaccacaggacccaactatctcagagcatatcattaaata 63
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctgtgtcaataccattaccacaggacccaactatctcagagcatatcattaaata 263
Query: 64 aaatataaattttgtatgtatagcattttatagaagtggtttaactgggaaaattttagt 123
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 264 aaatataaattttgtatgtatagcattttataaaagtggtttaactgggaaaattttagt 323
Query: 124 agtgtttgttaaaggataaaaataggcttcatcctgttactattgatgactcagacttac 183
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agtgtttgttaaagaataaaaataggcttcatcctgttactattgatgactcagacttac 383
Query: 184 ttaaaatactgttaaatatagctaatgccaagaataaatataactataaagcttttattt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttaaaatactgttaaatatagctaatgccaagaataaatataactataaagcttttattt 443
Query: 244 tctaagcatccataaaataagtatttaaaagtcacatttttgtcacttacagctatttga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tctaagcatccataaaataagtatttaaaagtcacatttttgtcacttacagctatttga 503
Query: 304 caagctggaatcattctatttagcccaaagaaaagataagacagtttttgacattaacat 363
|||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 504 caagctggaatcgttctatttagccaaaagaaaagataagacagtttttgacattaacat 563
Query: 364 tcctaatctgatgtgtttttcctgcctcaactatcccatgtccttccagaaagtaattag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tcctaatctgatgtgtttttcctgcctcaactatcccatgtccttccagaaagtaattag 623
Query: 424 gtcatccagacagtgaaaggtcagatttgttggtcatctgtttgtcgccattattctcaa 483
|||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 624 gtcatccagacagtgaaaggccaggtttgttggtcatctgtttgtcgccattattctcaa 683
Query: 484 cagaccccagataattctcatttccttatctccagaggcaacacactcaacagccccaca 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 cagaccccagataattctcatttccttatctccagaggcaacacactcaacagccccaca 743
Query: 544 ctggagttaaagagtacactgctgg 568
|||||||||||||||||||||||||
Sbjct: 744 ctggagttaaagagtacactgctgg 768
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 968
Length adjustment: 10
Effective length of query: 558
Effective length of database: 958
Effective search space: 534564
Effective search space used: 534564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no103_g11.g1 MSMg01no103_g11.g1 CHROMAT_FILE:
MSMg01no103_g11.g1 PHD_FILE: MSMg01no103_g11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:02:19 2005
(173 letters)
>mm_chr15_40949823_40950396
Length = 574
Score = 321 bits (166), Expect = 1e-92
Identities = 172/174 (98%), Gaps = 1/174 (0%)
Strand = Plus / Minus
Query: 1 cttaa-acacaattctggtgtagaagtagttggagaccattaacataactgtaaacactc 59
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 cttaacacacaattctggtgtagaagtagttggagaccattaacataactgtaaacactc 315
Query: 60 atatcatgtcataaggccagttctctagagtgtgaaaaaaaattggtgaggtttctaacc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 atatcatgtcataaggccagttctctagagtgtgaaaaaaaattggtgaggtttctaacc 255
Query: 120 agagaccagaattaaagagcgagagaagagaatttttacggaatatattaacta 173
|||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 254 agagaccagaattaaagagcgagagaagagaattttcacggaatatattaacta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 173
Length of database: 574
Length adjustment: 8
Effective length of query: 165
Effective length of database: 566
Effective search space: 93390
Effective search space used: 93390
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
