Query= MSMg01no103_o17.b1 MSMg01no103_o17.b1 CHROMAT_FILE:
MSMg01no103_o17.b1 PHD_FILE: MSMg01no103_o17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:02:59 2005
(655 letters)
>mm_chr15_29053674_29054726
Length = 1053
Score = 1141 bits (590), Expect = 0.0
Identities = 600/604 (99%), Gaps = 2/604 (0%)
Strand = Plus / Minus
Query: 1 gatgagtctcaccttcaaaaagttggaagaactggctgctgagaactgtctctatagggc 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 602 gatgagtctcaccttcaaaaagttgggagaactggctgctgagaactgtctctatagggc 543
Query: 61 agatagaaggacaggcaggaatcgtcacgagtcacccttaggcactctatgtcacttgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 agatagaaggacaggcaggaatcgtcacgagtcacccttaggcactctatgtcacttgtc 483
Query: 121 atacagaccaaattgtcagtaatccatctttcaatttaagtctgtttttattctgcagag 180
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 482 atacagaccaaattgtcagtaattcatctttcaatttaagtctgtttttattctgc--ag 425
Query: 181 tcacacttcatacatgtgtactctacgggtctgaacaggacactgtcaccttcctaggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tcacacttcatacatgtgtactctacgggtctgaacaggacactgtcaccttcctaggtt 365
Query: 241 tgtgctataccctgtacattttaaaaatgaacaattatattttaaaaaaccatggtacat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tgtgctataccctgtacattttaaaaatgaacaattatattttaaaaaaccatggtacat 305
Query: 301 tctgaacctattttcttaactctaaactcaattaccattttctattcatgagccatccta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tctgaacctattttcttaactctaaactcaattaccattttctattcatgagccatccta 245
Query: 361 acacagtatgaaggagatcatttaataatactttctaatattggaaaaataatatttaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 acacagtatgaaggagatcatttaataatactttctaatattggaaaaataatatttaaa 185
Query: 421 ataatttcacatacaaacacttaaaagaataatctgcattattagcaatttcgcacttca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 ataatttcacatacaaacacttaaaagaataatctgcattattagcaatttcgcacttca 125
Query: 481 gagtatgtgtattttactattgttgggaaataaaggtaaaccgtataatgatggataata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 gagtatgtgtattttactattgttgggaaataaaggtaaaccgtataatgatggataata 65
Query: 541 ttgattgtcaacttgacagaatctagacaaacttctgaatgtgtctgtaagggagatatc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 ttgattgtcaacttgacagaatctagacaaacttctgaatgtgtctgtaagggagatatc 5
Query: 601 agac 604
||||
Sbjct: 4 agac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1053
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1043
Effective search space: 672735
Effective search space used: 672735
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no103_o17.g1 MSMg01no103_o17.g1 CHROMAT_FILE:
MSMg01no103_o17.g1 PHD_FILE: MSMg01no103_o17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:02:59 2005
(597 letters)
>mm_chr15_28889368_28890364
Length = 997
Score = 1100 bits (569), Expect = 0.0
Identities = 590/597 (98%)
Strand = Plus / Plus
Query: 1 attaggaacattagtttcatccatgtgatttagagtgcaatgtgaaatgttacatgggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attaggaacattagtttcatccatgtgatttagagtgcaatgtgaaatgttacatgggtt 260
Query: 61 ttcctgctaggatttttgtaaatacattaatgatgaataaatgtgaacacttgatgctac 120
|||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 ttcctgctagtatttttgtaaatacattaatgatgaataaatgtgaactcttgatgctac 320
Query: 121 acttagaaaaatgaggtaaccgttgaaaaaaatctaagattttgggcatgtgtttatgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acttagaaaaatgaggtaaccgttgaaaaaaatctaagattttgggcatgtgtttatgta 380
Query: 181 tcaaaaagctatattgttggttgcagatgtttacaaacgtagatgctaggaatactattg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 381 tcaaaaagctatattgttggttgcagatgtttacaaacgtagatgctaggaaaactattg 440
Query: 241 ggagtacatacagaaaggccagtcgccaagcatactgctataaagcatgggttttagagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggagtacatacagaaaggccagtcgccaagcatactgctataaagcatgggttttagagc 500
Query: 301 tattggaattgaacggagaagcttattgttaagcatatcaagttaatgtataattaattt 360
|| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 501 taatggaattgaactgagaagcttattgtcaagcatatcaagttaatgtataattaattt 560
Query: 361 gcataaaacattgagaatgtgctagaatatttgaagtacttactttggtttataaatatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcataaaacattgagaatgtgctagaatatttgaagtacttactttggtttataaatatt 620
Query: 421 aggttatgatgtgtttaaagggcatctgtagagaatagatctatccagactacaacgcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aggttatgatgtgtttaaagggcatctgtagagaatagatctatccagactacaacgcag 680
Query: 481 agttatttagtttggagatacttccctcatcctctctatatagccagtagagagctatgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agttatttagtttggagatacttccctcatcctctctatatagccagtagagagctatgg 740
Query: 541 cagggaaaattatggacaaaccatccataaatctttcaactagaaatgtgctccaca 597
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 741 cagggaaaattatggacaaaccatccacaaatctttcaactagaaatgtgctccaca 797
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 997
Length adjustment: 10
Effective length of query: 587
Effective length of database: 987
Effective search space: 579369
Effective search space used: 579369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
