TCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCCTTTTGTTGTCTACTTGCTCTGGCTAGGACTTCAAGATTATATTGAA
TAGGTAGGGAGAAAATGAGCAGCGTTGTCTAGTCCCTGCTTTTAGTGGAA
TTGCTCCCAGTTTCTCACCACTTACTTTGATGTTGGCTACTAGTGTGCTG
TATATTGTTTTTATTATGTTTAAGTATGGGCCTTGAGTTCCTGATCTTCC
CAAGACTTTTATCATGAAGGGGTGTTGGACTTTGTCAAATGCTTTCTCAG
CTACTAATTAGATGATCATGGGGTTTTTCCCTTTGAGTTTCATTATATAG
TGGATTAAATTGATGGATTTCCATATATTGAACCATCCTTGCATCCCTGA
GATGAAGCCTACTTGACCATGATGGATGATCATTTTGATGTGCTCTTGGA
TTCGGTTTGCGAGAATTTTATTGAGTATTTTTCATCGATCTTCATACGGG
AATATCAGTCAGAAGCTGTCTTTCTTTGTTGTGTCTCTGTGTGCTTTAGG
TATCATACCACTACCTTCGATGTGACTCTAATTTATGACCTGACTGACCC
GCTGTTACCCACTTCTTATCCCATGCCTTGGCATGCTTAGGCTCGCGTAT
TTCTGACTTCCAGTCTAGCCTGGTCTATTAAGTGATTTTCAGGACTGTCT
TTGCTATCTCGA

NTCAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTATCAGAGCTTCAAAGAAGACCTA
ATCCCAATACTCTTCAAACTATTCCACAAAATAAAAACAGAAGGAGCATT
AACCAATTCATTCTATGAAGCCACTGTTACACTGTGTATTCTCCCTAGGA
GATGGAATGGTTTCTGTCTAATCAGAAACCTGTCACAATTTCCCTTCATA
GAGAACTTCATAAGAGATATTTTTTCTACTTCTATTATGTGTAATGTTCC
AAATGGATATTAAAAACTAGTTTAGTGCATATTACTTTTAGCTTTAGAAG
ACATCATGTATATTTAAGAGGCACTTAACTATTATAAATTATTTTGATGA
CTTAGAAAATGTCAATACTGAGTCCTATATTTTAAAATAAATTTTAGTAG
TTTAATATATATATATATACATATATATACATATATATTTCTATAAATTC
TGATATAAAGAGAGGAAAATGCTCACTGAAGTGAGCTTACATGTGATCAA
GACATGGAAATGTGAAAATAAGTAGTTAAAAATACAGAGATAATAAGTGA
AAAAAGAGAAAAGTTAGTGTGTTGGGATCAACAAGATACAAGGCAGAGTA
GAAGAAAAAAACCAACAAAGGCAAAGATCAGTCAACAGAAATTATATAAA
AAGAACCA

Query= MSMg01no104_i21.g1 MSMg01no104_i21.g1 CHROMAT_FILE:
MSMg01no104_i21.g1 PHD_FILE: MSMg01no104_i21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:03:51 2005
         (601 letters)



>mm_chr15_4205255_4206255
          Length = 1001

 Score = 1112 bits (575), Expect = 0.0
 Identities = 594/601 (98%), Gaps = 3/601 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tatcagagcttcaaagaagacctaatcccaatactcttcaaactattccacaaaataaaa 60
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 tatcagaccttcaaagaagacctaatcccaatactcttcaaactattccacaaaataaaa 263

                                                                       
Query: 61  acagaaggagcattaaccaattcattctatgaagccactgttacactgtgtattctccct 120
           |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 264 acagaaggagcattaaccaattcattctatgaagccacagtgacactgtgtattctccct 323

                                                                       
Query: 121 aggagatggaatggtttctgtctaatcagaaacctgtcacaatttcccttcatagagaac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aggagatggaatggtttctgtctaatcagaaacctgtcacaatttcccttcatagagaac 383

                                                                       
Query: 181 ttcataagagatattttttctacttctattatgtgtaatgttccaaatggatattaaaaa 240
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttcataagagatattttt-ctacttctattatgtgtaatgttccaaatggatattaaaaa 442

                                                                       
Query: 241 ctagtttagtgcatattacttttagctttagaagacatcatgtatatttaagaggcactt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ctagtttagtgcatattacttttagctttagaagacatcatgtatatttaagaggcactt 502

                                                                       
Query: 301 aactattataaattattttgatgacttagaaaatgtcaatactgagtcctatattttaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aactattataaattattttgatgacttagaaaatgtcaatactgagtcctatattttaaa 562

                                                                       
Query: 361 ataaattttagtagtttaatatatatatatatacatatatatacatatatatttctataa 420
           |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||
Sbjct: 563 ataaattttagtagtttaatatatatatata--catatatatacatatatatttctataa 620

                                                                       
Query: 421 attctgatataaagagaggaaaatgctcactgaagtgagcttacatgtgatcaagacatg 480
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 621 attctgatataaagagaggaaaatgttcactgaagtgagcttacatgtgatcaagacatg 680

                                                                       
Query: 481 gaaatgtgaaaataagtagttaaaaatacagagataataagtgaaaaaagagaaaagtta 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gaaatgtgaaaataagtagttaaaaatacagagataataagtgaaaaaagagaaaagtta 740

                                                                       
Query: 541 gtgtgttgggatcaacaagatacaaggcagagtagaagaaaaaaaccaacaaaggcaaag 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gtgtgttgggatcaacaagatacaaggcagagtagaagaaaaaaaccaacaaaggcaaag 800

            
Query: 601 a 601
           |
Sbjct: 801 a 801


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1001
Length adjustment: 10
Effective length of query: 591
Effective length of database: 991
Effective search space:   585681
Effective search space used:   585681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)