NAAATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTCTGATCTGTCAAAGCGCGGGCTGTTCCATGACCCCATCGT
GGTAGAGCATGCACTGACACAGAAGGCCATTCATAAACAGAAGGCCACTG
CCCTCTGTCACTAAAGGACACTGGGTAGGGCATGGAGTTGTAGCAAATTG
GCTTTCTCAGACATGTTGACTGACTTAAGCTGTTTCATTCAGCGCTGCTT
TAAATAAATGTTGCATTGATTTTCTAAACCCCAAAGGGCTTTTAACCCCT
TATAAAGACAGGAATAGTTCTTAATTTTACATTAAAACGTCACTGACTCC
CCTGTTCTGTGGGATGAAGAGCGACAGAGATTTTTCACCTTCATACTTAT
GGTAGGAAAGCTTTCTGATTGCCGTAGGCTTTCTAGCCACCTCTCTTCAT
TTGTATTGAAACCCAAAGTGTTTCAGTGTGTGAGCAGGTAATTCCTAAGG
GCTGCAGATCTCTGGTTTTTTGCTACACTGTGGATAAATCTACATCTCAT
AAGAAGAAAATCCGTGCTAAAACAGCTTAGTGTCAACCCCCGTCCACACA
CCAGTTCGTTGTGATGCTCATACTGTTTTTAAATTGTCTGCATTCAAACC
AACAAAGAGGTGAAGCTCAGAGGGCAGGTCTTTCAAAAGAGAGCT

NCTCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXAAACAGGGCAGGAACATAGAGGC
AGATGCTGTAGAGGCATGGCTACTACTTATTAGGTTGATCCGTATGACCC
GCTCAGCTTCCTTTCTCATAGAACGCAGGACTACCAGGCAAGGGGTGGAA
CCACCCACAGTGGGCTGGGCCCTCCCCATCCATTACTAATTAAGAAAACA
TTCTATAGGCTTGCCAACAGCCTGATCTTAGATAGGCATTTTCTCAGTTG
AAGCTTTTTTTTCTCCCCTCAGATGACTATAGTTTGTGTCAAGTTGGCAT
AAATCTAGCTAGCACAGTCCCTCTTTCTTTCAAAGATTCTATTGAAAAGT
AAGGTGTTATTCTGATAGGTCTGTCTTTGTGTGTGACAAGATCTTTCTGT
CTTTCTGATCTCGGTATTCATTCTTTGCACTGTACATTTAATATTTGGTT
ACTATGTGATATAGAGAGGTGTGGTTTTTATTTTCCTGGCACATTCTCTT
TGGTGTTCTGTGTGCTTCTTGCACCTTACTAAGCATCTCTCTTAAGATTT
GAGGATTTTTCCACTATCGCTTTGATGAAAGTTTTTCACATTCTTTCCAT
GGATTTCCATAGGCTTCTTCTCCTTATTTATCTAGCATTCATAGGTTTGG
TCTTTTACTGGCGTCTCA

Query= MSMg01no108_f20.b1 MSMg01no108_f20.b1 CHROMAT_FILE:
MSMg01no108_f20.b1 PHD_FILE: MSMg01no108_f20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:12 2005
         (640 letters)



>mm_chr15_91321014_91322053
          Length = 1040

 Score = 1176 bits (608), Expect = 0.0
 Identities = 629/636 (98%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctctgatctgtcaaagcgcgggctgttccatgaccccatcgtggtagagcatgca 64
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 gaattctctgaactgtcaaagcgcgggctgttccatgaccccatcgtggtagagcatgca 781

                                                                       
Query: 65  ctgacacagaaggccattcataaacagaaggccactgccctctgtcactaaaggacactg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 780 ctgacacagaaggccattcataaacagaaggccactgccctctgtcactgaaggacactg 721

                                                                       
Query: 125 ggtagggcatggagttgtagcaaattggctttctcagacatgttgactgacttaagctgt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 ggtagggcatggagttgtagcaaattggctttctcagacatgttgactgacttaagctgt 661

                                                                       
Query: 185 ttcattcagcgctgctttaaataaatgttgcattgattttctaaaccccaaagggctttt 244
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 ttcattcagcactgctttaaataaatgttgcattgattttctaaaccccaaagggctttt 601

                                                                       
Query: 245 aaccccttataaagacaggaatagttcttaattttacattaaaacgtcactgactcccct 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 aaccccttataaagacaggaatagttcttaattttacattaaaacgtcactgactcccct 541

                                                                       
Query: 305 gttctgtgggatgaagagcgacagagatttttcaccttcatacttatggtaggaaagctt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 gttctgtgggatgaagagcgacagagatttttcaccttcatacttatggtaggaaagctt 481

                                                                       
Query: 365 tctgattgccgtaggctttctagccacctctcttcatttgtattgaaacccaaagtgttt 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 480 tctgattgccgtaggctttctagccacctctcttcatttgtattgaaaccctaagtgttt 421

                                                                       
Query: 425 cagtgtgtgagcaggtaattcctaagggctgcagatctctggttttttgctacactgtgg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 cagtgtgtgagcaggtaattcctaagggctgcagatctctggttttttgctacactgtgg 361

                                                                       
Query: 485 ataaatctacatctcataagaagaaaatccgtgctaaaacagcttagtgtcaacccccgt 544
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 360 ataaatctacatctcataagaagaaaatctgtgctaaaacagcttagtgtcaaccccagt 301

                                                                       
Query: 545 ccacacaccagttcgttgtgatgctcatactgtttttaaattgtctgcattcaaaccaac 604
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ccacacaccagttcattgtgatgctcatactgtttttaaattgtctgcattcaaaccaac 241

                                               
Query: 605 aaagaggtgaagctcagagggcaggtctttcaaaag 640
           ||||||||||||||||||||||||||||||||||||
Sbjct: 240 aaagaggtgaagctcagagggcaggtctttcaaaag 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1040
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1030
Effective search space:   648900
Effective search space used:   648900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)