MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-109D04
Chromosome	15 (Build37)
Map Location	73,391,640 - 73,391,866
singlet/doublet	singlet
Overlap gene	Dennd3
Upstream gene	1810044A24Rik, LOC665621, Peg13, LOC100041120, Chrac1, Eif2c2, Ptk2, LOC666053, LOC100040929
Downstream gene	Slc45a4, Gpr20, LOC100040946, pPtp4a3, Gm628, LOC100041273, EG625276, LOC100040966, EG666113, LOC100041307, LOC100040984, Bai1
Link	Open Mouse BAC browser

Click to get alignment info.

name	1810044A24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76510 MGI:1923760
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC665621 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665621
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Peg13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:353342 MGI:2663476
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041120 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041120
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 185 ESTs, 7 Proteins

name	Chrac1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93696 MGI:2135796
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Eif2c2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239528 MGI:2446632
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ptk2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14083 MGI:95481
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666053 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666053
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 64 ESTs, 6 Proteins pseudo : _no_value

name	LOC100040929 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040929
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 1186 ESTs, 9 Proteins

name	Dennd3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:105841 MGI:2146009
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc45a4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:106068 MGI:2146236
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpr20 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239530 MGI:2441803
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040946 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040946
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	pPtp4a3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19245 MGI:1277098
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm628 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:268816 MGI:2685474
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041273 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041273
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 225 ESTs, 4 Proteins

name	EG625276 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:625276 MGI:3647277
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100040966 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040966
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	EG666113 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666113 MGI:3646370
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 164 ESTs, 9 Proteins

name	LOC100041307 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041307
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 902 ESTs, 23 Proteins

name	LOC100040984 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040984
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Bai1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:107831 MGI:1933736
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1810044A24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:68264925 GeneID:76510 MGI:1923760
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1810044A24 gene transcript_id : NM_180662.1

name	1810044A24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:30840991 GeneID:76510 MGI:1923760
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1810044A24 gene transcript_id : NM_029640.1

name	LOC100041120 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149266659 GeneID:100041120
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 185 ESTs, 7 Proteins product : similar to G protein gamma-5 subunit transcript_id : XM_001476327.1

name	Chrac1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365642 GeneID:93696 MGI:2135796
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chromatin accessibility complex 1 transcript_id : NM_053068.3

name	Eif2c2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33859782 GeneID:239528 MGI:2446632
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : eukaryotic translation initiation factor 2C, 2 transcript_id : NM_153178.2

name	Ptk2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679740 GeneID:14083 MGI:95481
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PTK2 protein tyrosine kinase 2 transcript_id : NM_007982.1

name	LOC100040929 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149266642 GeneID:100040929
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 1186 ESTs, 9 Proteins product : similar to Rpl17 protein transcript_id : XM_001475503.1

name	Dennd3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486709 GeneID:105841 MGI:2146009
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DENN/MADD domain containing 3 transcript_id : NM_001081066.1

name	Slc45a4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142380401 GeneID:106068 MGI:2146236
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 45, member 4 transcript_id : NM_001033219.2

name	Gpr20 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142378498 GeneID:239530 MGI:2441803
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 20 transcript_id : NM_173365.2

name	pPtp4a3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543526 GeneID:19245 MGI:1277098
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein tyrosine phosphatase 4a3 transcript_id : NM_008975.2

name	Gm628 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803126 GeneID:268816 MGI:2685474
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 628, (NCBI) transcript_id : NM_001033365.2

name	LOC100041273 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149266668 GeneID:100041273
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 225 ESTs, 4 Proteins product : similar to NADH dehydrogenase 1 beta subcomplex 4 transcript_id : XM_001476571.1

name	EG625276 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94398717 GeneID:625276 MGI:3647277
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG625276 transcript_id : XM_898698.2

name	EG666113 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149266670 GeneID:666113 MGI:3646370
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 164 ESTs, 9 Proteins product : predicted gene, EG666113 transcript_id : XM_981687.2

name	LOC100041307 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149266673 GeneID:100041307
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 902 ESTs, 23 Proteins product : similar to high-mobility group box 1 transcript_id : XM_001476607.1

name	LOC100040984 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149266644 GeneID:100040984
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to T-SNARE domain containing 1 transcript_id : XM_001475612.1

name	Bai1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:92110032 GeneID:107831 MGI:1933736
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : brain-specific angiogenesis inhibitor 1 transcript_id : NM_174991.3

name	1810044A24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:68264926 GeneID:76510 MGI:1923760
definition	codon_start : 1 exception : mismatches in translation note : isoform 2 is encoded by transcript variant 2; Ikk2 binding protein; NIK and IKK(beta) binding protein product : NIK and IKK(beta) binding protein isoform 2 protein_id : NP_850993.1

name	1810044A24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30840992 GeneID:76510 MGI:1923760
definition	codon_start : 1 note : isoform 1 is encoded by transcript variant 1; Ikk2 binding protein; NIK and IKK(beta) binding protein product : NIK and IKK(beta) binding protein isoform 1 protein_id : NP_083916.1

name	LOC100041120 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149266660 GeneID:100041120
definition	codon_start : 1 product : similar to G protein gamma-5 subunit protein_id : XP_001476377.1

name	Chrac1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18860511 CCDS:CCDS27516.1 GeneID:93696 MGI:2135796
definition	GO_component : GO:0008623 - chromatin accessibility complex [Evidence ISS]; GO:0008622 - epsilon DNA polymerase complex [Evidence ISS]; GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003893 - epsilon DNA polymerase activity [Evidence ISS]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IDA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006338 - chromatin remodeling [Evidence ISS] codon_start : 1 note : NF-YC-like protein product : chromatin accessibility complex 1 protein_id : NP_444298.1

name	Eif2c2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859783 GeneID:239528 MGI:2446632
definition	GO_function : GO:0005515 - protein binding [Evidence IPI] codon_start : 1 exception : mismatches in translation function : siRNA-mediated RNAi? note : GERp95; Piwi/Argonaute family protein meIF2C2; argonaute 2 product : eukaryotic translation initiation factor 2C, 2 protein_id : NP_694818.2

name	Ptk2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679741 GeneID:14083 MGI:95481
definition	GO_component : GO:0016324 - apical plasma membrane [Evidence IDA]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005925 - focal adhesion [Evidence IDA]; GO:0030027 - lamellipodium [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005488 - binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0001568 - blood vessel development [Evidence IMP]; GO:0006928 - cell motility [Evidence TAS]; GO:0040023 - establishment of nucleus localization [Evidence IDA]; GO:0030198 - extracellular matrix organization and biogenesis [Evidence IMP]; GO:0007229 - integrin-mediated signaling pathway [Evidence TAS]; GO:0000226 - microtubule cytoskeleton organization and biogenesis [Evidence IDA]; GO:0046621 - negative regulation of organ size [Evidence IGI]; GO:0001764 - neuron migration [Evidence IMP] [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 exception : mismatches in translation note : focal adhesion kinase product : PTK2 protein tyrosine kinase 2 protein_id : NP_032008.1

name	LOC100040929 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149266643 GeneID:100040929
definition	codon_start : 1 product : similar to Rpl17 protein protein_id : XP_001475553.1

name	Dennd3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486710 GeneID:105841 MGI:2146009
definition	codon_start : 1 product : DENN/MADD domain containing 3 protein_id : NP_001074535.1

name	Slc45a4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701720 CCDS:CCDS27517.1 GeneID:106068 MGI:2146236
definition	codon_start : 1 exception : mismatches in translation product : solute carrier family 45, member 4 protein_id : NP_001028391.1

name	Gpr20 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27734082 CCDS:CCDS27518.1 GeneID:239530 MGI:2441803
definition	GO_function : GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : G protein-coupled receptor GPR20 product : G protein-coupled receptor 20 protein_id : NP_775541.1

name	pPtp4a3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543527 CCDS:CCDS27519.1 GeneID:19245 MGI:1277098
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004725 - protein tyrosine phosphatase activity [Evidence IEA] codon_start : 1 product : protein tyrosine phosphatase 4a3 protein_id : NP_033001.2

name	Gm628 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701862 CCDS:CCDS27520.1 GeneID:268816 MGI:2685474
definition	codon_start : 1 product : hypothetical protein LOC268816 protein_id : NP_001028537.1

name	LOC100041273 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149266669 GeneID:100041273
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476621.1

name	EG625276 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82957475 GeneID:625276 MGI:3647277
definition	codon_start : 1 product : hypothetical protein protein_id : XP_903791.1

name	EG666113 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94398719 GeneID:666113 MGI:3646370
definition	codon_start : 1 product : similar to Splicing factor 3b, subunit 4 protein_id : XP_986781.1

name	LOC100041307 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149266674 GeneID:100041307
definition	codon_start : 1 product : similar to high-mobility group box 1 protein_id : XP_001476657.1

name	LOC100040984 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149266645 GeneID:100040984
definition	codon_start : 1 product : similar to T-SNARE domain containing 1 protein_id : XP_001475662.1

name	Bai1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:92110033 GeneID:107831 MGI:1933736
definition	GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0016525 - negative regulation of angiogenesis [Evidence ISS]; GO:0007218 - neuropeptide signaling pathway [Evidence IEA] codon_start : 1 product : brain-specific angiogenesis inhibitor 1 protein_id : NP_778156.2

name	LOC665621 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665621
definition	number : 1 pseudo : _no_value

name	LOC100040946 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040946
definition	number : 2 pseudo : _no_value

name	LOC100040946 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040946
definition	number : 1 pseudo : _no_value

name	LOC100040966 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040966
definition	number : 1 pseudo : _no_value

name	LOC100040966 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040966
definition	number : 2 pseudo : _no_value

name	LOC100040966 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040966
definition	number : 3 pseudo : _no_value

name	Peg13 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:84872159 GeneID:353342 MGI:2663476
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : paternally expressed 13 transcript_id : NR_002864.1

name	LOC666053 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149266663 GeneID:666053
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 64 ESTs, 6 Proteins product : similar to protein tyrosine phosphatase-like protein PTPLB pseudo : _no_value transcript_id : XR_032745.1

clone name	MSMg01-351M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-215M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441E14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-545J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-202D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103L22
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-109D04.T7 (MSMg01no109_d04.b1)	MSMg01-109D04.TJ (MSMg01no109_d04.g1)
ACC	AG322443	AG322444
length	875	719
length of high quality (start - end)	---	228 (89 - 316)
definition	CHROMAT_FILE: MSMg01no109_d04.b1 PHD_FILE: MSMg01no109_d04.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:12:19 2005	CHROMAT_FILE: MSMg01no109_d04.g1 PHD_FILE: MSMg01no109_d04.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:12:19 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	TGTAATCCNTTATTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTT TCCAAGAATCGCGCTGGAATTCATGACACAATTTTCCTAACNAGGGACTC GCATACGGTAGGATCATGGAGGATAAGCGCTTACTATCATACCGCATGTA TAACATGATATCTTGACATCCCTGGTTGCCCACACTTAGTCTTGTGCTAT GTATCTTCTTACGCTACGTGGTTCTATTACCGACACTTTTGCTACCTCTA TTACGCCCGACTTGCTTATACCCCGCACCTCTCACATTAATAATAATCGC CCTCGATTTTTTCGCCCTTTATTGGCGCCTATCTTGATCTGCGCCGGTAC GCCCTGTCATTACCGACCCCACCGATACCCGCACCCGTACACTTTTCATA TACATATGATTTAACACTATTAATATCCAATATACCATTATTTTCTTCCT TTTCTTATACCTCATCCTAGATCCAATATTCCCCTCATGATTTACTCTTC TTATCAATTATATACCGAAAGCCGCCCCCTTTGCTTCCTATCCGCCATAA CAATCTTCCCCCATTTTTCCCTCTTCTTTTATCCCTATTTACCCATCCTA TCTCAATAATTATTTTTATTTTTACAAAACAAACCTCTCCTTTTAACCAT TCATTTTCGTTTACCACATACCCCCCTATTTTACCCTTTTCCACGCCCTC CCCCCCATTTACGCCTTAAATCCCCCTTTATTCACACTATCATTTATCCC TTCCACAACCCGCCCCCTGTTCCTTTATCCCCCACTTACTTTTTTTTCTC TCTTCCCTTCTTCCCTTAATGCTCTACTCCTCCCCCTTTCTTCCTTATTC TCCCCCCCTCCTTTCCGTTTCGCGC	NTTAGTATATTTTNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCGTCGTGCTGT GACCTGAGCTCGGATGGCTCCTCCTGCGTCCTGGGAACAAGGTGATGATG ACAGATTGTGTGCTGGGTGTTACTATGGCAACTCTGTAAACTGTTTACAG AGGCCATGAACTGCTGTCACTGAGGAGGAGTACATTTAAAGTTGTATAAA CAGCTGAAGCGTACTGTGTATTTGAGTTTACTCTCATCTGACGCACAGGA GCAGTTCTGTTGAGACCCAGAACTGTTAGAGCTCCCAGAGGGCTCAATGG GTCTCCAGCCAACCTGGGGACACCTGAGCCTCCTGGCTTCTGTCCCAGCT GAGGAACAGGTTCTATGACCAGAAAGCATCACGGCCACACAGTCAGTGAC ACAGATTACGAAGGGCAAGGTGAAGCTAAGCCAAGGTGTCATTTTCTAAC GCTTGGACAGCTGTTTGTAAAACCTGACTGCACACCCAAGACAGAGGGAA TGACACACACTTCACAGACATTCACGGCGGCCTTCCTTTGTTATACGCAA TGCTTATCCAACTTACGTGTCCACTACCGATGAAGCGATAGAGTATGTAA TGCTGTCCAACACCCCCTTTTCGTAGCTGCTAAAGAATTGAATTACTGCC AACCCTGTATTTTGTCTTT
quality values	Open. Hide. 9 9 9 9 9 9 9 3 0 3 8 8 8 8 10 10 8 10 10 9 11 14 18 16 12 9 10 10 13 13 22 16 11 13 22 24 29 34 33 17 14 16 14 14 13 23 19 24 18 17 19 18 12 9 9 9 9 8 8 8 8 6 8 6 6 6 12 19 19 19 15 8 8 8 8 8 8 8 8 9 9 9 12 10 10 10 9 9 6 6 3 0 3 8 8 18 11 8 8 8 6 8 8 8 8 13 10 6 6 6 7 10 12 15 19 14 14 10 10 6 6 8 8 10 9 8 8 8 8 8 10 26 18 10 8 8 8 11 10 18 8 8 8 9 10 10 10 10 8 8 8 8 10 10 8 10 6 6 6 10 9 11 11 13 13 9 9 8 11 13 10 13 8 8 8 9 9 11 12 23 23 18 19 12 8 8 6 6 8 8 10 11 10 10 12 8 8 8 8 8 10 18 26 17 17 10 13 12 12 8 8 8 10 10 10 6 6 8 8 9 9 10 10 9 10 9 10 8 10 8 8 6 8 6 6 8 10 14 13 9 9 9 10 10 10 8 8 8 8 10 10 10 10 8 8 8 10 11 11 10 9 9 10 8 8 8 8 8 10 10 12 28 12 12 6 6 8 10 10 15 10 10 10 15 19 17 15 15 8 8 7 6 8 8 11 8 8 8 8 12 10 10 10 11 8 8 8 9 9 10 22 19 19 12 12 13 11 11 10 10 10 10 10 9 8 6 6 6 8 6 6 8 10 14 14 13 8 8 8 8 8 8 10 11 9 9 9 9 9 9 9 11 15 19 15 15 10 11 8 10 8 8 13 13 17 17 14 14 15 12 8 7 12 6 7 8 8 8 10 8 9 10 13 8 7 8 8 8 8 8 8 8 11 12 11 11 10 10 8 10 9 7 8 6 11 12 12 11 11 11 11 11 11 9 6 8 6 6 6 6 8 8 7 7 11 10 11 9 10 10 11 17 13 22 9 7 7 7 6 6 6 7 10 8 10 8 6 6 6 7 10 8 10 8 8 8 8 10 10 10 9 9 9 8 8 8 8 11 8 8 8 12 12 6 8 10 8 8 6 11 13 16 19 19 9 8 10 8 8 8 8 8 8 8 8 8 10 6 6 6 6 6 6 8 8 8 8 8 8 10 10 9 9 9 6 6 6 6 10 6 9 9 9 10 11 13 13 14 14 11 11 9 9 9 10 10 8 8 8 8 8 8 12 11 6 8 6 6 8 8 9 10 9 9 10 10 9 9 9 10 8 8 8 8 8 8 13 13 12 19 12 11 11 10 12 10 8 10 10 8 8 8 8 10 10 8 8 8 10 15 15 15 13 10 10 8 6 6 6 6 6 8 8 8 8 8 10 9 9 8 8 6 6 8 8 8 10 11 11 13 11 10 9 9 9 9 15 10 8 8 8 8 10 8 9 8 8 6 6 6 6 8 8 8 8 8 8 9 8 8 8 6 6 6 11 8 8 8 8 8 8 10 8 8 6 6 6 10 10 10 8 9 12 21 19 15 10 10 15 14 19 11 12 8 8 12 10 12 12 13 7 8 7 6 6 6 8 8 9 9 11 11 11 13 7 7 7 7 7 6 10 8 8 8 8 16 15 8 8 8 8 8 12 18 18 18 13 15 11 11 11 9 9 8 8 9 8 8 8 8 8 8 9 10 13 8 8 8 8 8 10 9 10 10 9 10 13 10 9 8 8 8 8 11 8 10 8 7 7 7 10 10 13 11 10 10 10 11 16 13 8 10 8 8 8 10 7 7 7 9 9 10 12 20 18 13 10 8 8 8 8 8 8 8 8 8 8 8 8 8 9 12 11 14 11 10 6 6 6 6 6 6 8 10 8 10 8 11 10 10 10 11 17 14 19 27 27 28 14 9 8 8 8 8 8 11 11 8 7 6 9 6 12 10 14 9 10 7 7 7 8 14 22 16 12 11 12 12 12 12 9 9 9 9 9	Open. Hide. 0 3 9 11 11 9 9 9 9 9 10 21 3 0 3 6 6 8 8 10 10 9 9 13 18 22 13 8 8 8 19 19 34 34 28 24 24 28 28 30 39 39 23 27 9 9 9 14 9 9 9 9 9 10 16 17 24 16 21 30 27 22 13 13 17 26 21 37 30 24 15 14 9 10 11 11 19 11 10 8 8 8 8 15 22 32 28 28 28 28 30 30 25 25 25 29 36 36 25 25 25 36 36 42 40 40 30 28 28 33 34 32 19 19 29 25 28 32 32 40 42 48 57 48 48 47 39 39 35 37 28 32 21 14 12 18 24 24 24 24 30 30 32 35 42 42 47 42 42 37 37 30 30 37 37 37 47 32 38 18 19 19 25 32 18 15 13 11 19 24 36 42 47 48 43 44 23 23 23 23 43 43 43 52 52 43 43 52 52 43 43 43 43 52 52 43 43 35 32 27 24 15 15 13 18 18 32 38 28 32 39 57 43 57 57 57 57 52 52 52 43 28 24 10 10 11 21 24 43 43 43 44 29 28 28 43 43 43 37 37 35 32 32 20 20 20 32 43 43 43 27 32 27 32 27 32 18 15 11 11 11 27 27 32 27 12 11 11 12 27 24 35 32 32 19 19 32 32 46 54 57 57 44 44 23 23 23 36 29 19 11 12 14 24 24 30 44 44 42 42 35 35 37 39 43 36 40 37 28 30 25 28 23 25 23 26 23 11 11 11 11 23 28 23 20 9 9 9 12 23 19 19 23 24 21 15 12 12 18 22 23 23 23 33 37 39 35 28 30 32 32 28 32 32 39 22 18 9 9 9 23 23 37 30 30 18 18 17 17 15 26 24 30 37 30 30 20 28 28 32 32 43 37 34 30 28 25 28 32 32 32 28 31 25 24 24 17 16 10 9 9 9 9 10 16 15 24 19 22 22 22 21 28 34 34 33 36 32 28 24 18 18 14 15 15 20 20 19 19 14 12 12 16 18 23 24 23 15 15 15 16 16 16 12 12 15 19 22 28 22 15 14 14 14 26 30 23 15 13 8 8 10 12 12 12 12 12 12 12 18 13 12 18 12 12 13 18 21 11 13 21 22 19 16 21 14 14 14 21 32 32 24 32 32 28 28 21 15 8 8 8 8 13 21 14 12 19 20 21 28 28 37 39 40 36 23 20 20 23 23 28 22 19 21 17 16 16 24 19 18 14 21 21 12 12 15 12 12 12 8 8 10 11 8 8 11 11 11 11 12 12 14 18 19 19 13 13 13 15 15 23 22 16 16 10 10 11 16 12 12 12 17 8 8 8 8 8 6 7 8 8 17 15 19 18 18 20 28 22 25 17 14 10 8 8 9 8 8 8 10 11 11 9 9 9 12 13 14 14 18 15 17 18 24 28 20 26 19 15 11 11 12 12 8 13 8 8 8 8 11 15 22 18 8 8 8 8 8 8 9 9 9 10 10 13 13 12 11 11 18 15 12 15 10 9 8 8 8 8 10 10 9 9 11 9 9 10 10 9 9 10 10 17 17 12 12 9 8 8 10 8 8 10 10 10 11 15 15 13 13 13 13 15 15 9 9 9 9 10 9 11 11 11 10 8 6 6 6 8 8 20 21 21 14 11 10 11 13 13

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no109_d04.g1 MSMg01no109_d04.g1 CHROMAT_FILE:
MSMg01no109_d04.g1 PHD_FILE: MSMg01no109_d04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:12:19 2005
         (228 letters)



>mm_chr15_73391440_73392066
          Length = 627

 Score =  410 bits (212), Expect = e-119
 Identities = 224/228 (98%), Gaps = 1/228 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcgtcgtgctgtgacctgagctcggatggctcctcctgcgtcctgggaacaaggtgatga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tcgtcgtgctgtgacctgagctcggatggctcctcctgcgtcctgggaacaaggtgatga 368

                                                                       
Query: 61  tgacagattgtgtgctgggtgttactatggcaactctgtaaactgtttacagaggccatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tgacagattgtgtgctgggtgttactatggcaactctgtaaactgtttacagaggccatg 308

                                                                       
Query: 121 aactgctgtcactgaggaggagtacatttaaagttgtataaacagctgaagcgtactgtg 180
           |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| 
Sbjct: 307 aactgctgtcaccgaggaggagtacatttaaagttgtataaacagctgaagtgtactgtt 248

                                                           
Query: 181 tatttgagtttactctcatctgacgcacaggagcagttctgttgagac 228
           ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 247 tatttgagtttactctcatctga-gcacaggagcagttctgttgagac 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 228
Length of database: 627
Length adjustment: 9
Effective length of query: 219
Effective length of database: 618
Effective search space:   135342
Effective search space used:   135342
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information