Query= MSMg01no113_l21.b1 MSMg01no113_l21.b1 CHROMAT_FILE:
MSMg01no113_l21.b1 PHD_FILE: MSMg01no113_l21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:19:16 2005
(613 letters)
>mm_chr15_49717899_49718912
Length = 1014
Score = 934 bits (483), Expect = 0.0
Identities = 540/559 (96%), Gaps = 1/559 (0%)
Strand = Plus / Minus
Query: 5 gaattcaccacatgagcatatctcactctaagtatcacttgaaggctgatgactttttct 64
|||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gaattcaccacatgagtatatttcactctaagtatcacttgaaggctgatgactttttct 500
Query: 65 gtcttgagttccactcccatacaaatattgccttttataaatcctccctatgtcttctat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gtcttgagttccactcccatacaaatattgccttttataaatcctccctatgtcttctat 440
Query: 125 tatccataatataatttaggtttataaagctcacttttctgaatattcttgaacacataa 184
||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 439 tatccattatataatttgggtttagaaagctcacttttctgaatattcttgaacacataa 380
Query: 185 ctttctggaaccctaaaattaagtacttgtagtattttccttttga-aatttttttcttt 243
|||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 379 ctttctggaaccataaaattaagtacttgtagtattttccttttgacattttttttcttt 320
Query: 244 ctcaattttccatgtttaatgacaagagttttaaaaataatttattctaatctcttgctg 303
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 319 ctcaattttccatgtttaatgacaagagttttaaaattaatttattctaatctcttgctg 260
Query: 304 ttatagctataatatttgtaatacaaccttttgttttctaatagttttctatttgaaatt 363
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 259 ttatagctataatatttgtaatacaactttttgttttctaatagttttctatttgaaatt 200
Query: 364 aattttaactttaaatatactatttaacatatattttagactgtttatattagatatctc 423
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 199 aattttaactttaaatatactatttaacatatactttagactgtttatattagatatctc 140
Query: 424 atgctccttttggcaatcttgacagaaagaagggatagttataaactgtgtgcaaaatta 483
||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 139 atgctccttttggtaatcttgacacaaagaagggatagttataaattgtgtgcaaaatta 80
Query: 484 ataatatcaatactgaatccaaaggtattttaacatgtacaagttgttatatctatttgc 543
|| |||||||||||| |||||||| ||| |||||||||||||||||||||||||| ||||
Sbjct: 79 atcatatcaatactgtatccaaagatatcttaacatgtacaagttgttatatctacttgc 20
Query: 544 tatgattttaggaaacata 562
|||||||||||||||||||
Sbjct: 19 tatgattttaggaaacata 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1014
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1004
Effective search space: 605412
Effective search space used: 605412
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no113_l21.g1 MSMg01no113_l21.g1 CHROMAT_FILE:
MSMg01no113_l21.g1 PHD_FILE: MSMg01no113_l21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:19:16 2005
(563 letters)
>mm_chr15_49646694_49647656
Length = 963
Score = 1050 bits (543), Expect = 0.0
Identities = 558/563 (99%)
Strand = Plus / Plus
Query: 1 aaaactcaaaattcttttgccagttagtttggaagctgttttaagtgaagatgatgaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaactcaaaattcttttgccagttagtttggaagctgttttaagtgaagatgatgaaat 260
Query: 61 gtgtgcttacttggttagatcaaaatcagatgtcttgttggcattttacgatttgggttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgtgcttacttggttagatcaaaatcagatgtcttgttggcattttacgatttgggttt 320
Query: 121 aaaaccaaaccaaaacccttccttttgtccaaaacagactctggaaggcactgacatcat 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaatcaaaccaaaacccttccttttgtccaaaacagactctggaaggcactgacatcat 380
Query: 181 ttttctaactttgcactgagtagctgatgtagctctccctaagaacagacagggtggaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttctaactttgcactgagtagctgatgtagctctccctaagaacagacagggtggaga 440
Query: 241 agctactacctgggtcaatacacttagtctgaaaaaaccctaaagcaggaagcgctgctc 300
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 441 agctactacctgggtcaatacacttagtctgaaaaaaccctgaagcaggaagcgctgctc 500
Query: 301 aaggatcaaaaacccagacatataaaacatgctgtacactgcccgtgggtgagtgatttg 360
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 501 aaggatcaaaaacccagacatataaaacatgctgtacactggccgtgggtgagtgatttg 560
Query: 361 tctactgttctgatcttagctctattaaatgcaatgccctaggcaccaacactagttaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tctactgttctgatcttagctctattaaatgcaatgccctaggcaccaacactagttaaa 620
Query: 421 ccaaacaagcaaacagaattaggcaattccaactgtttctgccagtctcttgaaccccta 480
|||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 621 ccaaacaagcaaacagaattaggcaattccaactgtctctgacagtctcttgaaccccta 680
Query: 481 ctgtgttccagctaatgtaaaatatgctctggtataaatttgtcataaaatagcatgtca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctgtgttccagctaatgtaaaatatgctctggtataaatttgtcataaaatagcatgtca 740
Query: 541 acgcacaagcattgattcatttt 563
|||||||||||||||||||||||
Sbjct: 741 acgcacaagcattgattcatttt 763
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 963
Length adjustment: 10
Effective length of query: 553
Effective length of database: 953
Effective search space: 527009
Effective search space used: 527009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
