Query= MSMg01no113_n22.b1 MSMg01no113_n22.b1 CHROMAT_FILE:
MSMg01no113_n22.b1 PHD_FILE: MSMg01no113_n22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:19:26 2005
(552 letters)
>mm_chr15_16293001_16293952
Length = 952
Score = 942 bits (487), Expect = 0.0
Identities = 533/549 (97%), Gaps = 4/549 (0%)
Strand = Plus / Minus
Query: 5 gaattctactgcaattccctataagtaatcatagcacaggaagctatataacaataacag 64
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 gaattctactgcaattttctataagtaatcatagcacaggaagctatataacaataacag 579
Query: 65 aaatgacaaaaatatccaggtataaaaaggtaagtacttaacaaaatgaatgataattta 124
|||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 578 aaatgacaaaaatatctaggtataaaaaggaaagtacttaacaaaatgaatgataattta 519
Query: 125 tctgtcactaaatcatacacagtatcaagaataccgctatgaaatgagacagttgacatc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 tctgtcactaaatcatacacagtatcaagaataccgctatgaaatgagacagttgacatc 459
Query: 185 aaaatgttttattttaaagctaaaagctccatggaaaaatgtatttgtcactaaaccaga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 aaaatgttttattttaaagctaaaagctccatggaaaaatgtatttgtcactaaaccaga 399
Query: 245 ttttatatcatctgtttgtttggtttacttcttgattatgaagaaatctcccttcagaac 304
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 398 ttttatatcatctgtttgtttggtttacttcttgattatgaagaagtctcccttcagaac 339
Query: 305 tttcagagtgctaaagagcttctctccagaatgcaagctttaaatcataagaaatagc-a 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 338 tttcagagtgctaaagagcttctctccagaatgcaagctttaaatcataagaaata-cta 280
Query: 364 cactttaggccaatcattgactctgagtctcccatttgtcctctaagacacctgtgcaca 423
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 279 cactttaggccaatcattgactctgagtctcccatatgtcctctaagacacctgtgcaca 220
Query: 424 catggtatatttgtaacacgcacacaccaaaaacacacacatacacacacacacacatac 483
|||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||
Sbjct: 219 catggtatatttgtaagacacacacaccaaaaacacacacat--acacacacacacatac 162
Query: 484 atacacacaaacatacaatgtaataatataaatataaatccttttttaaataacaagact 543
|||||||||||||||||||| || ||||||||| |||| |||||||||||||||||||||
Sbjct: 161 atacacacaaacatacaatgcaacaatataaatttaaacccttttttaaataacaagact 102
Query: 544 cttaatcca 552
|||||||||
Sbjct: 101 cttaatcca 93
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 552
Length of database: 952
Length adjustment: 10
Effective length of query: 542
Effective length of database: 942
Effective search space: 510564
Effective search space used: 510564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no113_n22.g1 MSMg01no113_n22.g1 CHROMAT_FILE:
MSMg01no113_n22.g1 PHD_FILE: MSMg01no113_n22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:19:26 2005
(525 letters)
>mm_chr15_16151462_16152386
Length = 925
Score = 922 bits (477), Expect = 0.0
Identities = 513/525 (97%)
Strand = Plus / Plus
Query: 1 acttcatgctcatgagcaaagtcaaaaaatatgttgtcaatttctttgattcttttgctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acttcatgctcatgagcaaagtcaaaaaatatgttgtcaatttctttgattcttttgctt 260
Query: 61 ttttgccagacaacaaaatcctttaaattaagaattagttgtacctagtaaaatcacata 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 ttttgccagacaacaaaatcctttaaattaagaattagttctacctagtaaaatcacata 320
Query: 121 taaattagaaatcactagtgttaagggacaactaagaacaaaaaaaattagaatctaagc 180
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 321 taaattagaaatcactagtgttaagggacaactaagaacagaataaattagaatctaagc 380
Query: 181 atatgatcacatgtgtgtaaaatcatacacacacacacaccataacaaaacaaaaaatac 240
||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atatgttcatatgtctgtaaaatcatacacacacacacaccataacaaaacaaaaaatac 440
Query: 241 aacttaatcgctgccattttcattttaagaaattgtatgtaaattaatttttatagtgta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 441 aacttaatcgctgccattttcattttaagaaattgtatgtaaattaatttttatactgta 500
Query: 301 tattctaaatgatctgcaaagaaaatgtctccactattaattctcttatggtaagcaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tattctaaatgatctgcaaagaaaatgtctccactattaattctcttatggtaagcaatt 560
Query: 361 acattgctaagtgcctattttcaactgctacaatgataaacttaatttgacaatagtaaa 420
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 561 acattgctaagtgtctattttcaactgctacaatgataaacttaatttgacaatagttaa 620
Query: 421 attatctttgatgtcaaatagatcctgaagtttaatttcattcatttattttcaggatat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 attatctttgatgtcaaatagatcctgaagtttaatttcattcatttattttcaggatat 680
Query: 481 atgattttagactggatcaacacaggtagcaagaatatgtgaagt 525
||||||||||||| ||||||||||| ||| |||||||||||||||
Sbjct: 681 atgattttagactagatcaacacagttagtaagaatatgtgaagt 725
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 925
Length adjustment: 10
Effective length of query: 515
Effective length of database: 915
Effective search space: 471225
Effective search space used: 471225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
