Query= MSMg01no116_e19.b1 MSMg01no116_e19.b1 CHROMAT_FILE:
MSMg01no116_e19.b1 PHD_FILE: MSMg01no116_e19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:22:31 2005
(364 letters)
>mm_chr15_55382172_55382934
Length = 763
Score = 650 bits (336), Expect = 0.0
Identities = 357/364 (98%), Gaps = 1/364 (0%)
Strand = Plus / Plus
Query: 1 acagctgcttgctaaactactaaatgttgaaaataaattcttaagagacaatgcatttta 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 acagctgcttgctaaactactaaatgttgaaaataaattcttaagagacaatgcattt-a 259
Query: 61 tcgaatgctggtgatttagaaatttgactgtagcgacatcttgtggtcatgagaagcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tcgaatgctggtgatttagaaatttgactgtagcgacatcttgtggtcatgagaagcttt 319
Query: 121 gctgatggagagctacatgttcaacacagtgaggcaagcaggaatttaatcttgaagaag 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gctgatggacagctacatgttcaacacagtgaggcaagcaggaatttaatcttgaagaag 379
Query: 181 ttcagtttcccaatgtattcatgaaatccctaggtaaatggacagaactagaaaatatca 240
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 380 ttcagtttcccaatgtattcatgaaatccctaggcaaatggacagaactagaaaatatca 439
Query: 241 tcctgagtgagggaacccaatcataaaacaacacacatggtgtgcactcactgataagtg 300
||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 440 tcctgagtgagggaacccaatcacaaaacaacacacatggtgtacactcactgataagtg 499
Query: 301 gatactagctccaaagctccagataaccaggatacaattcacagaccacatgaagctcaa 360
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gatactagccccaaagctccagataaccaggatacaattcacagaccacatgaagctcag 559
Query: 361 taag 364
||||
Sbjct: 560 taag 563
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 763
Length adjustment: 9
Effective length of query: 355
Effective length of database: 754
Effective search space: 267670
Effective search space used: 267670
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no116_e19.g1 MSMg01no116_e19.g1 CHROMAT_FILE:
MSMg01no116_e19.g1 PHD_FILE: MSMg01no116_e19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:22:31 2005
(457 letters)
>mm_chr15_55482574_55483432
Length = 859
Score = 849 bits (439), Expect = 0.0
Identities = 454/459 (98%), Gaps = 2/459 (0%)
Strand = Plus / Minus
Query: 1 tgtattccatctctgaattactactactaataaacaaggaacactgaaaacatgctaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 tgtattccatctctgaattactactactaataaacaaggaacactgaaaacatgctaagt 600
Query: 61 ctgaatttctacattttcagtgcaaagtcctaattctaagaattgaagagttgggttcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 ctgaatttctacattttcagtgcaaagtcctaattctaagaattgaagagttgggttcat 540
Query: 121 tttggtctcaaggcttt-aaaagttgtttagtgtataattcttgggggg-aaaatctaat 178
||||||||||||||||| |||| ||||||||||||||| |||||||||| ||||||||||
Sbjct: 539 tttggtctcaaggctttaaaaaattgtttagtgtataagtcttggggggaaaaatctaat 480
Query: 179 tttaaaaagataaatatgttttcagagataaataaatcacctgtaaaattggttggcatt 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 tttaaaaagataaatatgttttcagagataaataaatcacctgtaaaattggttggcatt 420
Query: 239 ttaatggatctgtttctacactttcttttcatgttatattaagctagtgttatattaaga 298
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 ttaatggacctgtttctacactttcttttcatgttatattaagctagtgttatattaaga 360
Query: 299 actttacaaaaatgcctttccccatattgacacagaatatttataaaaataatcttaatg 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 actttacaaaaatgcctttccccatattgacacagaatatttataaaaataatcttaatg 300
Query: 359 gtataggcaatactccacccagaagatttgcacacatgtacacagtaggtacttgtattc 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 gtataggcaatactccacccagaagatttgcacacatgtacacagtaggtacttgtattc 240
Query: 419 caagtggattcaatctggggaaagtgtccttttgcaact 457
|||||||||||||||||||||||||||||||||||||||
Sbjct: 239 caagtggattcaatctggggaaagtgtccttttgcaact 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 859
Length adjustment: 10
Effective length of query: 447
Effective length of database: 849
Effective search space: 379503
Effective search space used: 379503
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
