Query= MSMg01no124_p18.b1 MSMg01no124_p18.b1 CHROMAT_FILE:
MSMg01no124_p18.b1 PHD_FILE: MSMg01no124_p18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:36:50 2005
(225 letters)
>mm_chr15_86254468_86255087
Length = 620
Score = 354 bits (183), Expect = e-102
Identities = 214/227 (94%), Gaps = 9/227 (3%)
Strand = Plus / Minus
Query: 1 tagagaatgtgtcctgtcaccaggagcc-c-cttccagggaacacactttgatttctatc 58
|||||||||||||||||||||||||||| | | |||||||||||||||||||| |||||
Sbjct: 420 tagagaatgtgtcctgtcaccaggagccgcac--ccagggaacacactttgattcctatc 363
Query: 59 acctggccattctgtcagctccagaaggtcccactcaggccagtgtgctctgtccttggc 118
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 362 acctggccattctgtcagctccagaaggtcccactcaggccagtgtgttctgtccttggc 303
Query: 119 tccctaggccagcacgatgaaggggactctgctctgcagcttcggagcactgtgaccctg 178
|||||||||||| || || |||||||||||||||||||||||||||||||||||||
Sbjct: 302 tccctaggccag-accctg----ggactctgctctgcagcttcggagcactgtgaccctg 248
Query: 179 tctagttgatgtgcacctgagacttagcaggtgtgagatctgtgaat 225
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tctagttgatgtgcacctgagacttagcaggtgtgagatctgtgaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 225
Length of database: 620
Length adjustment: 9
Effective length of query: 216
Effective length of database: 611
Effective search space: 131976
Effective search space used: 131976
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no124_p18.g1 MSMg01no124_p18.g1 CHROMAT_FILE:
MSMg01no124_p18.g1 PHD_FILE: MSMg01no124_p18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:36:50 2005
(139 letters)
>mm_chr15_86081992_86082530
Length = 539
Score = 261 bits (135), Expect = 1e-74
Identities = 138/139 (99%)
Strand = Plus / Plus
Query: 1 ctcataggacccacattgctttccaagatcaggggtgggctgagggttcttctggtgagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcataggacccacattgctttccaagatcaggggtgggctgagggttcttctggtgagg 260
Query: 61 cctgtcctctttgttgaagatgtcacttaaactttgtccccatatggctctgcttttgta 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 cctgtcctctttgttgaagatgtcacttaaactttgtccccatatggctttgcttttgta 320
Query: 121 tatgtacggaaagagaaat 139
|||||||||||||||||||
Sbjct: 321 tatgtacggaaagagaaat 339
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 139
Length of database: 539
Length adjustment: 8
Effective length of query: 131
Effective length of database: 531
Effective search space: 69561
Effective search space used: 69561
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
