AAATTTGCGGCGCTAAACGACTCCTATATCCAGAGATCCGCGGAATTCAT
AACATTTTACCGAAAACATATTTCAGGCACAGACTACTAATGGTACTGGC
CTTTTGCTATACTGGTCCTAGCCTTGGTTCAGGGTATCAGTACCTGGAAT
TGGAGCTGCCTTTACCTCTGTTCTTAATGCTGTTTCCAGAGCCATCTGGC
TGGCTGGGCTGTTTCTGCACATGTTTAACAGCAGGTATGTGAGAAATATC
AGCGTACCTCTATCCCAGTGATGGGTGTGCTGTTTACTGCCCTTTCCATA
AAGGAACACTTAGGGGAGAGTGGTCCCTTGCGGTGACGTCACACAGAAAC
CTTCCATCAGGATTGTGGATGAGGTCCTGGATCTTTCAGAGGTCCTATAC
AAGGTGAACCTTCAGGATAATGTCTTCACTGAAGCGTGCAAGCCAAGCAC
ATTCCTTCCAGCTGCGTTGACCAAAGAATTCTTAACGAAGGAACAGCCCA
GCCCTGGATATGAAACTTTAAAACCCCACCTGATTTTGACAGACAAGCTG
AGTTTCGGCTTCTCTCTATAGCATCTGAGTTTTGAACGGGCACAGAAAGG
GAACATTGTGTTTGCAAACCACTCCCTGGAACATATGCTACCTCAAGCCT
TCTGGATAATTTTGGTCTGAATGTTCCTCTCCCCTTAAGGC

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXAAGTGACAGCAAAGTTGCTTCTCCCTGAGG
GATATAAGCAAGAATCTATTCCAGCTTCCCCCAGGCTCCTGTTAGCCTCA
GCTTGCAGATTGCTTTCTTCCCATGTTAGTTCCCTTTGTGTCTATCTCTA
TAACCAAATTGACCTTATATGTAAGGATATTCAACACACTGGATAAAAGC
TCACTCATCTTAAGTTGATCATTTGCTAAAGCCATATTTCAAAATAAAAG
TATATTTGTAGGCACTGGGAATTATGACTGTAAAATATTAGGACAGACAT
GTTGGCAAATGTCTATAATCAGCTCTCAGGAACCTGAGTCAGAAGGAAAG
TGATGTCAGCATCTCAGCCACATAGTAAGACCTTGTCTCTGATAGAGAGA
AAGAAAATAGGAGCACAAGTTTACTGTTGGCAAAATAGATAGAAAACTCT
GCAGTCAACTGTAAGAAAGGGCCAACTGGCAGCACATAAAATTACTTGCA
GTTGGAATCAACAGTAATGATGAATGATGAAAAAATAATGGAATTTGACC
CCAGATGCTCCAGAGAAATATTTCCCAAAACTTACTGCTTCCAACTGCCT
TGTTTTTCCCAGTAAATGAATTGAGAAATTGCCCCTTTCAGTGTCN

Query= MSMg01no126_n03.b1 MSMg01no126_n03.b1 CHROMAT_FILE:
MSMg01no126_n03.b1 PHD_FILE: MSMg01no126_n03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:21 2005
         (433 letters)



>mm_chr15_28533264_28534096
          Length = 833

 Score =  717 bits (371), Expect = 0.0
 Identities = 410/423 (96%)
 Strand = Plus / Plus

                                                                       
Query: 6   gaattcataacattttaccgaaaacatatttcaggcacagactactaatggtactggcct 65
           |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcataacattttaatgaaaacatatttcaggcacagactactaatggtactggcct 265

                                                                       
Query: 66  tttgctatactggtcctagccttggttcagggtatcagtacctggaattggagctgcctt 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tttgctatactggtcctagccttggttcagggtatcagtacctggaattggagctgcctt 325

                                                                       
Query: 126 tacctctgttcttaatgctgtttccagagccatctggctggctgggctgtttctgcacat 185
           || ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 326 tagctctgttcttaatgctgtttccagagccatctggcaggctgggctgtttgtgcacat 385

                                                                       
Query: 186 gtttaacagcaggtatgtgagaaatatcagcgtacctctatcccagtgatgggtgtgctg 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gtttaacagcaggtatgtgagaaatatcagcgtacctctatcccagtgatgggtgtgctg 445

                                                                       
Query: 246 tttactgccctttccataaaggaacacttaggggagagtggtcccttgcggtgacgtcac 305
           ||||||||||||||||||||||||||||||||| || |||||||||||| ||||| ||||
Sbjct: 446 tttactgccctttccataaaggaacacttagggaagggtggtcccttgcagtgacttcac 505

                                                                       
Query: 306 acagaaaccttccatcaggattgtggatgaggtcctggatctttcagaggtcctatacaa 365
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 506 acagaaaccttccatcaggattgtggatgaggtcctggatctttcagaggtcctattcaa 565

                                                                       
Query: 366 ggtgaaccttcaggataatgtcttcactgaagcgtgcaagccaagcacattccttccagc 425
           ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |
Sbjct: 566 ggtgaaccttcaggataatgtcttcaccgaagcgtgcaagccaagcagattccttccaac 625

              
Query: 426 tgc 428
           |||
Sbjct: 626 tgc 628


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 833
Length adjustment: 9
Effective length of query: 424
Effective length of database: 824
Effective search space:   349376
Effective search space used:   349376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no126_n03.g1 MSMg01no126_n03.g1 CHROMAT_FILE:
MSMg01no126_n03.g1 PHD_FILE: MSMg01no126_n03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:21 2005
         (447 letters)



>mm_chr15_28575594_28576440
          Length = 847

 Score =  717 bits (371), Expect = 0.0
 Identities = 380/383 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   aagtgacagcaaagttgcttctccctgagggatataagcaagaatctattccagcttccc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 aagtgacagcaaagttgcttctccctgagggatataagcaagaatctattccagcttccc 324

                                                                       
Query: 61  ccaggctcctgttagcctcagcttgcagattgctttcttcccatgttagttccctttgtg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ccaggctcctgttagcctcagcttgcagattgctttcttcccatgttagttccctttgtg 264

                                                                       
Query: 121 tctatctctataaccaaattgaccttatatgtaaggatattcaacacactggataaaagc 180
           |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 263 tctatctctataaccaaattgaccttatgtgtaaggatattcgacacactggataaaagc 204

                                                                       
Query: 181 tcactcatcttaagttgatcatttgctaaagccatatttcaaaataaaagtatatttgta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tcactcatcttaagttgatcatttgctaaagccatatttcaaaataaaagtatatttgta 144

                                                                       
Query: 241 ggcactgggaattatgactgtaaaatattaggacagacatgttggcaaatgtctataatc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 ggcactgggaattatgactgtaaaatattaggacagacatgttggcaaatgtctataatc 84

                                                                       
Query: 301 agctctcaggaacctgagtcagaaggaaagtgatgtcagcatctcagccacatagtaaga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83  agctctcaggaacctgagtcagaaggaaagtgatgtcagcatctcagccacatagtaaga 24

                                  
Query: 361 ccttgtctctgatagagagaaag 383
           |||||||||||| ||||||||||
Sbjct: 23  ccttgtctctgaaagagagaaag 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space:   365769
Effective search space used:   365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)