Query= MSMg01no129_e17.b1 MSMg01no129_e17.b1 CHROMAT_FILE:
MSMg01no129_e17.b1 PHD_FILE: MSMg01no129_e17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:39 2005
(455 letters)
>mm_chr15_94896536_94897390
Length = 855
Score = 797 bits (412), Expect = 0.0
Identities = 445/456 (97%), Gaps = 2/456 (0%)
Strand = Plus / Plus
Query: 1 aagcaaaaacacacagttaacattcactcttttaaggcatgccaaataagggctgcagac 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 201 aagcaaaaacacacagttaacattcactcttttaaggcatgccaagtaagggctggagac 260
Query: 61 atgactcagcagtcaagagcactggctgcttttccatatgatccaggttcaatttctagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgactcagcagtcaagagcactggctgcttttccatatgatccaggttcaatttctagc 320
Query: 121 acacacatgttggctcacatctttaactccatttcagtggggtcctactcccttttctgg 180
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acacacatgctggcttacatctttaactccatttcagtggggtcctactcccttttctgg 380
Query: 181 tttccatgggtacaaggtatgcacataataacacaaacagggagacaaaacaataacaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttccatgggtacaaggtatgcacataataacacaaacagggagacaaaacaataacaca 440
Query: 241 caaaataaaaat-tcgtgaatctttagaaagagcaagtgctaagtaggttgggattgaca 299
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caaaataaaaatat-gtgaatctttagaaagagcaagtgctaagtaggttgggattgaca 499
Query: 300 gaccttggaaggtaaagctgaaaggagccattgctgtgtttctttgaacacagcgctacc 359
||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 500 gaccttggaaggtaaagctgaaatgagccattgctgtgtttctttgaatacagcgctacc 559
Query: 360 tctcactgctgtcttctcagccagccattgggctctcctcttctttccccgggagtctct 419
||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 560 tctcactgctgtcttcttagccagccattgcgctctcctcttctttccccaggagtctct 619
Query: 420 aagatgttaagcactccctccctcctgctcctgaac 455
||||||||||||||||||||||||||||||||||||
Sbjct: 620 aagatgttaagcactccctccctcctgctcctgaac 655
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space: 376025
Effective search space used: 376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no129_e17.g1 MSMg01no129_e17.g1 CHROMAT_FILE:
MSMg01no129_e17.g1 PHD_FILE: MSMg01no129_e17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:39 2005
(528 letters)
>mm_chr15_95074935_95075862
Length = 928
Score = 982 bits (508), Expect = 0.0
Identities = 523/528 (99%)
Strand = Plus / Minus
Query: 1 tctaatgaataactacttcaatatgccatacaacaaatacccattatttttatcagggta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 tctaatgaataactacttcaatatgccatacaacaaatacccattatttttatcagggta 669
Query: 61 atagggatataaaatgtagttagttgaattgaatagcagaatcctgaatggtggtgagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 atagggatataaaatgtagttagttgaattgaatagcagaatcctgaatggtggtgagca 609
Query: 121 cattgtaactgagtcacggcctatggtttatcaatcgagtcacagttgagataaagcaga 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 cattgtaactgagtcacagcctatggtttatcaatcgagtcacagttgagataaagcaga 549
Query: 181 atgctttgtcacataagaagttacggcgcaacctaccccttggaatgtgaatgagcacgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 atgctttgtcacataagaagttacggcgcaacctaccccttggaatgtgaatgagcacgt 489
Query: 241 cctgatcaatatcagtgctttcaaacctcctaattcttatcatgataccataacatatat 300
|||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 cctgctcactatcagtgctttcaaacctcctaattcttatcatgataccataacatatat 429
Query: 301 atgaatatttacctgacgctgcttctttaattcttctctttttttaaatatttaagttat 360
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 atgaatatttacctgatgctgcttctttaattcttctctttttttaaatatttaagttat 369
Query: 361 atttcacctctgtttttatgattatcccttgctgtaaatggaaataattgagaaaataag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 368 atttcacctctgtttttatgattatcccttgctgtaaatggaaataattgagaaaattag 309
Query: 421 tgcatagccattaaaatgaagtatttgtgtgctgctacccataaaccacatcgacggtga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 tgcatagccattaaaatgaagtatttgtgtgctgctacccataaaccacatcgacggtga 249
Query: 481 cagatatattgcactcagcgaaaacgtgctctatgtggctgtacattt 528
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 cagatatattgcactcagcgaaaacgtgctctatgtggctgtacattt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 928
Length adjustment: 10
Effective length of query: 518
Effective length of database: 918
Effective search space: 475524
Effective search space used: 475524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
